Acer007953.1
Basic Information
- Insect
- Apis cerana
- Gene Symbol
- SUB1
- Assembly
- GCA_029169275.1
- Location
- CM054904.1:12544333-12544979[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 3.3e+03 -1.7 0.2 29 37 16 24 6 24 0.75 2 2 2.2e-26 6e-22 77.5 0.3 1 51 55 106 55 107 0.96
Sequence Information
- Coding Sequence
- atgccGAAATCAAAAGAATATGTGTCTACGGATGATGACAGTAGTGATgagggAATGAAACcaaagaaaaagcaaaaaagggaaatagaggataaagaagagaaagtatcaaaaaagttaaaaaatgaatctaaTAAAGATGAATCTAATAAAGATACTGTTTGGGATTTAGGAAATAATCGTCAAATTAGTGTAAGAGActttaaaggaaaattatatgtCGACATCAGAGAAATGTACTATGATAAAGAAGCAAATTTAAAACCTGGAAAAAaaggtaTTTGCTTAAATGTAAcgcaatggaaaaaattattatctgttATGGATGATGTGGACAAAGCTGTAAAATCtaaatcttga
- Protein Sequence
- MPKSKEYVSTDDDSSDEGMKPKKKQKREIEDKEEKVSKKLKNESNKDESNKDTVWDLGNNRQISVRDFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLSVMDDVDKAVKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071030;
- 90% Identity
- iTF_00141834;
- 80% Identity
- -