Agos000044.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- dnajc2
- Assembly
- GCA_004010815.1
- Location
- NW:95829-99865[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-05 0.051 13.2 0.0 3 35 424 460 422 472 0.81 2 2 2.2e-13 1.4e-10 40.6 0.1 4 43 519 562 516 565 0.91
Sequence Information
- Coding Sequence
- atgaaagaCAAAGAGAAACCATCTATATTGAATGTTCAACATCGCACTGTAGAAACAGTCGGACCATGGATATTGAGATATTTATCAGGCTCAACTGTTCAagataaatgtttaactaaTGGCGAAGAAGTAGAAGATACCAATGAATCATTTATCGACGAAGAAAGTCAAGCAGAtacaatttatctaaaaactcTAGATCCTAAGGAATGGAAAGATCAGGATCATtatcaAGTTTTAGGATTATCAAAATTGCGGTATAAAGCCACAGAAGCACAAATCAAAAGTGCTTATAGACGTAGAGTTCTTAATCATCATCcagataaaagaaaaaagctTGGTGAGAAAGTTCAAGGAGATGATGATTATTTTACTTGCATCACTAAAGCTTGGGAAACTCTtggaaataaaactaaaagacGCGCATATGATTCAATTGATCCTAAATTTGATAACAGTATTCCTTCTAAGGAAACGGCAAAAAAATCTgacttttttgaattatttggcCCAGTATTTGTTCGTAATAGTATGTGGTCAGAACAAAATTCTGTACCACTTTTAGGAGATATAAATAGTAGTCGTGATCATGTTGATCGTTTCTACAATTTTTGGTATGGTTTCAATTCATGGAGAGAATTTTCATATCTTGATGAAGAAGATCGTGAACAGGCCTCAGATCGTGAAGAACGAAGATggattgaaaaacaaaatcgtgCAAATCGTACTAAGCTAAAAAAAGAAGAGAGTACTCGTATTAGACAGTTAGTTGACCTAGCATATGCTAATGATCCaagacttttaaaatttaaaaaggagGAACAAGAACGGAAAGCTGCTGTGAAACAAGCCAAAAAAGACGCAATAAGACAAAAACAAGAAGAAGAAATTAGACTAAGAGAAGAAGAAGAAGCCAAAgtacaaaaagaaaaagaagaacGTGAAGCTGCAGAAAAAGCACAACGAAATGCTCTTAAGGCAGAAAAAGATAGTCAAAAGAAAGCTTTGAAAAAAGAACGTAAGCATATAAGGGATTTATGTAAAgcaaataattactatattcaaAGCGGTGataatgttattgaaattatgtCCGGTGTTGAAAAAATTTGTGATCAACTTTCTGCCTTACAGCTTAAACAATTGTCCAGTTCTCTTCAAATAGAAGGTCGTAAAGCATTAATagaaaaacttaaacaaaTGGAATGTAGAGTTGAaatgaataatgttattaaaaatgataccaaaattgttgaaaaaaataataatgattgggAAACAGACGATGttcaattattgataaaagcAGTCAATTTGTTTCCTGCTGGTACGAACCAACGTTGGGAAGCTGTTGCAAATTTTATCAACCAACATAGTAAGAACGGTGAACGAAATGCCAAGCAAGTATTAGCAAAAGCTAAATCTCTTCAAAGTACTAACTACACTGataatgctttaaaatctGAAATGAATGCCAATGCGTATGATCAATTTGAAAAGGAGAAAAAATGTGAATCACAAATTCCTGAAGTGGTTTCAGAACGTCCAGTTGGATGGTCAGCAGATGAGCAAAAATTATTGGAACAAGCTCTTAAAACGTATCCAAATGCAGTAAAAGAACGTTGGGATAGAATAGCAGAATGTGTTCCAACAAGAACGAAAAAGGAATGTATGAAAAGATATAAAGAAATTGTTGAAATAGTTAAAGCCAAGAAAGCTGCTCAAGTATAA
- Protein Sequence
- MKDKEKPSILNVQHRTVETVGPWILRYLSGSTVQDKCLTNGEEVEDTNESFIDEESQADTIYLKTLDPKEWKDQDHYQVLGLSKLRYKATEAQIKSAYRRRVLNHHPDKRKKLGEKVQGDDDYFTCITKAWETLGNKTKRRAYDSIDPKFDNSIPSKETAKKSDFFELFGPVFVRNSMWSEQNSVPLLGDINSSRDHVDRFYNFWYGFNSWREFSYLDEEDREQASDREERRWIEKQNRANRTKLKKEESTRIRQLVDLAYANDPRLLKFKKEEQERKAAVKQAKKDAIRQKQEEEIRLREEEEAKVQKEKEEREAAEKAQRNALKAEKDSQKKALKKERKHIRDLCKANNYYIQSGDNVIEIMSGVEKICDQLSALQLKQLSSSLQIEGRKALIEKLKQMECRVEMNNVIKNDTKIVEKNNNDWETDDVQLLIKAVNLFPAGTNQRWEAVANFINQHSKNGERNAKQVLAKAKSLQSTNYTDNALKSEMNANAYDQFEKEKKCESQIPEVVSERPVGWSADEQKLLEQALKTYPNAVKERWDRIAECVPTRTKKECMKRYKEIVEIVKAKKAAQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167538;
- 90% Identity
- iTF_00468868; iTF_00811910; iTF_01037703; iTF_00018954; iTF_01305484; iTF_01169773; iTF_01304109; iTF_00463278; iTF_01433039; iTF_00670161; iTF_01167538; iTF_00135251; iTF_00972979; iTF_01304787; iTF_01032820; iTF_01328564; iTF_01346389; iTF_01330488; iTF_00134201; iTF_00940409; iTF_01350206; iTF_01031904; iTF_01347028; iTF_00308766;
- 80% Identity
- -