Basic Information

Gene Symbol
dnajc2
Assembly
GCA_013282895.1
Location
scaffold:40387271-40389851[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-06 0.016 16.0 0.0 3 40 424 465 422 466 0.88
2 2 1.1e-12 2.1e-09 37.9 0.1 4 43 519 562 516 565 0.92

Sequence Information

Coding Sequence
ATGAAAGACAAAGAAAAACCTCCTATTATAAATGGACAACTTTATAAAGTAGAAACTGTTGGACCATGGATTTTAACATATTTATCAGGGTCCACTATTCAAGATAAATGTTTAACTAACGGTAATGAAGTAGAAGACGCAAATGAATCATTCATAGATGAAGAAAATGAAGCAGACACAATTTATCTCAAGACTTTAGATCCTAAAGAATGGAAAGATCAAGATCATTATCAGGTGTTAGGTTTATCAAAACTGCGATATAAAGCTACTGAAGCACAAATCAAAAGTGCTTATAGACGTAGAGTTCTAAATCATCATCCAGATAAAAGAAAAAAACTAGGTGAAAAAGTTGAAGGTGATGATGATTACTTTACATGTATAACTAAAGCTTGGGAAACTCTTGGAAATAAAACAAAGAGACGTGCTTTTGATTCAATTGATCCTAAATTTGACAATGATATTCCTTCTAAAGAAATGGCCAAAAAGTCTGATTTCTTTGAATTATTCGGCCCTGTATTTGTTCGCAATAGCATATGGTCAGAACAAAGTTCTGTGCCACTTTTAGGAGATATAAATAGCAGCCGCGATCATGTTGATCGCTTTTATAATACTTGGTATGATTTTAATTCATGGCGAGAATTTTCATATCTTGATGAAGAAGATCGTGAACAAGCATCTGATCGTGAAGAACGTAGATGGATTGAAAAACAAAATCGTGCAAATCGGGCTAAAAAAAAAAAAGAAGAGAGTACTCGTATTAGGCAGTTAGTTGACTTGGCATATGCTAACGATCCAAGATTATTAAAGTTTAAAAAAGAGGAACAAGAACGGAAAGCTGCTTTAAAACAAGCAAAAAAAGATGCAATAAGACTAAAACAGGAAGAAGAAATCAGACAAAAAGAAGAAGAAGAAGCCAGAATAAAAAAAGAAAAAGAAGAATCTGAAGCTGTGGAAAAGGCACAAAGGAATGCTCTTAAGGCGGAAAAAGATAGTCAAAAGAAAGCGTTAAAAAAGGAGCGCAAACATATTAGAGATTTGTGTAAAACAAATAATTACTATATACAAAATGGTGACAATGTTATTGAAATAATGTCTGGCGTTGAAAAGATTTGTGATCAGCTTTCTGCATTACAGCTTAAACAATTAGCTAGTGCCCTCCAAGTAGAAGGTCGTAAAGCATTAATAGATAAACTTAAACAATTGGAATGCAGAGTTGAAATGAATAATGTTATAAAAAATGATACCAAAATTGTAGAAAAAAATAATAATGATTGGGAAACTGATGATATTCAGTTATTAATCAAAGCTGTAAATTTATTTCCTGCTGGTACAAATCAACGTTGGGAAGCTGTTGCAAATTTTATCAACCAGCATAGTAAAAATGGTGTACGGAATGCCAAACAAGTATTAGCAAAAGCTAAATCACTTCAAAGTACAAATTTTACCGATAATGCTTTAAAATCTGAAATGAATGCAAATGCATATGATCAATTTGAAAAAGAAAAAAAATGTGAAGCACAAGTGCCTGAAGTGGTTTCGGAACGTCCTGTTGGTTGGTCAGCAGATGAACAAAAATTATTAGAACAAGCTTTAAAGACATATCCAACTGCAATAAAAGATCGCTGGGATAGAATTGCAGAATGTGTCCCAACTAGAACGAAAAGGGAATGTATGAAAAGATATAAAGAAATTGTTGATTTAGTTAAAGCCAAGAGAGCTGCTCAAGTATAG
Protein Sequence
MKDKEKPPIINGQLYKVETVGPWILTYLSGSTIQDKCLTNGNEVEDANESFIDEENEADTIYLKTLDPKEWKDQDHYQVLGLSKLRYKATEAQIKSAYRRRVLNHHPDKRKKLGEKVEGDDDYFTCITKAWETLGNKTKRRAFDSIDPKFDNDIPSKEMAKKSDFFELFGPVFVRNSIWSEQSSVPLLGDINSSRDHVDRFYNTWYDFNSWREFSYLDEEDREQASDREERRWIEKQNRANRAKKKKEESTRIRQLVDLAYANDPRLLKFKKEEQERKAALKQAKKDAIRLKQEEEIRQKEEEEARIKKEKEESEAVEKAQRNALKAEKDSQKKALKKERKHIRDLCKTNNYYIQNGDNVIEIMSGVEKICDQLSALQLKQLASALQVEGRKALIDKLKQLECRVEMNNVIKNDTKIVEKNNNDWETDDIQLLIKAVNLFPAGTNQRWEAVANFINQHSKNGVRNAKQVLAKAKSLQSTNFTDNALKSEMNANAYDQFEKEKKCEAQVPEVVSERPVGWSADEQKLLEQALKTYPTAIKDRWDRIAECVPTRTKRECMKRYKEIVDLVKAKRAAQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01167538;
90% Identity
iTF_00136067;
80% Identity
-