Sgrm016962.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- dnajc2
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000308.1:13439-16746[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-05 0.11 13.2 0.0 3 35 424 460 422 472 0.81 2 2 2.1e-13 3e-10 40.6 0.1 4 43 519 562 516 565 0.91
Sequence Information
- Coding Sequence
- atgaaagaCAAAGAGAAACCAtcaatattaaatgttcaaCATCGTACAGTTGAAACAGTCGGACCATGGATATTGAGATATTTATCAGGCTCAACTGTTCAAGATAAATGTTTAACTAATGGTGAAGAAATAGAAGATACAAATGAATCATTTATCGACGAAGAAAGTCAAGCCGATACAATTTATCTAAAAACTTTAGATCCTAAGGAATGGAAAGATCAAGATCATTATCaAGTTTTAGGACTATCAAAATTACGATATAAAGCCACTGAAGCACAAATCAAAACTGCTTATAGGCGCAGAGTTCTTAATCATCATCCGGATAAAAGAAAAAAGCTTGGCGAGAAAGTTCAAGGAGATGATGATTATTTTACATGCATCACTAAAGCTTGGGAAACTCTTGGAAATAAAACTAAAAGACGTGCATATGATTCAATTGATCCTAAATTTGACAATAGTATTCCTTCTAAAGAAACAGCAAAAAAATCTgacttttttgaattatttgggCCGGTATTTGTTCGTAATAGTATGTGGTCAGAACAAAATTCTGTTCCCCTTTTAGGAGATATAAATAGTAGCCGTGATCATGTTGATCGTTTCTACAATTTTTGGTATGGTTTCAATTCATGGAGAGAATTTTCATATCTTGATGAAGAAGATCGTGAACAGGCCTCAGATCGTGAAGAACGAAGATggattgaaaaacaaaatcgtGCAAATCGTACTAAGCTAAAAAAAGAAGAGAGTACTCGTATTAGGCAGTTGGTTGACTTAGCATATGCTAATGATCCaagacttttaaaatttaaaaaggaagAACAAGAACGTAAAGCAGCTGTGAAACAAGCCAAAAAAGACGCAATTAGACAAAAACAAGAAGAAGAAATTAGGTTAAGAGAAGAAGAAGAAGCTAAagtacaaaaagaaaaagaagaacGCGAAGCTGCAGAAAAAGCACAACGAAATGCTCTTAAGGCAGAAAAAGATAGTCAAAAGAAAGCTTTGAAAAAAGAACGTAAACATATAAGGGATTTAtgcaaaacaaataattactatatacaaAACGGTGACaatgttattgaaataatgtCTGGTGTTGAAAAAATTTGTGATCAACTTTCTGCCATACAGCTTAAACAATTGGCCGGTGCTCTTCAAATAGAAGGTCGTAAAGCATTAAtagaaaaacttaaacaaatGGAATGTAGAGTTGAaatgaataatgttattaaaaatgataccaaaattgttgaaaaaaataataatgattgggAAACAGATGATGTTCAATTATTGATAAAAGCGGTAAATTTGTTTCCAGCTGGTACAAACCAACGTTGGGAAGCTGTTGCAAATTTTATCAACCAACATAGTAAGAATGGTGAACGAAACGCCAAACAAGTATTAGCAAAAGCCAAATCTCTTCAAAGTACTAACTACACTGATAATCCTTTAAAATCTGAAATGAATGCCAATGCATATGATCAatttgaaaaggaaaaaaaatgtgaatcaCAAATACCTGAAGTGGTTTCCGAACGTCCAGTTGGATGGTCAGCAGATGAGCAAAAATTATTGGAACAAGCTCTTAAAACGTATCCAAATGCAGTAAAAGAACGTTGGGATAGAATAGCAGAATGTGTTCCAACAAGAACGAAAAAGGAATGTATGAAAAGATATAAAGAAATTGTTGAAATAGTTAAAGCCAAAAAAGCCGCTCAAGTGTAA
- Protein Sequence
- MKDKEKPSILNVQHRTVETVGPWILRYLSGSTVQDKCLTNGEEIEDTNESFIDEESQADTIYLKTLDPKEWKDQDHYQVLGLSKLRYKATEAQIKTAYRRRVLNHHPDKRKKLGEKVQGDDDYFTCITKAWETLGNKTKRRAYDSIDPKFDNSIPSKETAKKSDFFELFGPVFVRNSMWSEQNSVPLLGDINSSRDHVDRFYNFWYGFNSWREFSYLDEEDREQASDREERRWIEKQNRANRTKLKKEESTRIRQLVDLAYANDPRLLKFKKEEQERKAAVKQAKKDAIRQKQEEEIRLREEEEAKVQKEKEEREAAEKAQRNALKAEKDSQKKALKKERKHIRDLCKTNNYYIQNGDNVIEIMSGVEKICDQLSAIQLKQLAGALQIEGRKALIEKLKQMECRVEMNNVIKNDTKIVEKNNNDWETDDVQLLIKAVNLFPAGTNQRWEAVANFINQHSKNGERNAKQVLAKAKSLQSTNYTDNPLKSEMNANAYDQFEKEKKCESQIPEVVSERPVGWSADEQKLLEQALKTYPNAVKERWDRIAECVPTRTKKECMKRYKEIVEIVKAKKAAQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167538;
- 90% Identity
- iTF_00136067;
- 80% Identity
- -