Agos003064.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- cnc
- Assembly
- GCA_004010815.1
- Location
- NW:15316-54858[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-16 5.4e-13 48.2 5.1 3 61 475 533 473 537 0.91
Sequence Information
- Coding Sequence
- ATGATGCAGTGTTATTCTCAACCACCGCCATCCTCTAGGCATTTCCAAGGCAGGATGGGCTACACGAGAACGGGCAACAGTGGAATGGACCAGCGAGGCTGGCAGGACTTGGCTACATGCAGCCCCATGTTAGCGTTCCCGGTCGAAGGACAGCACCACCACCATCAGTCCCATTATGGTCAGCATCCGTCCGGCGCACTCAGTTACCCGCCCGGGCCCAGCATGTATCACCATCCTCATCACCATCAACATCACCACCAACACAACAACCacaacagcaacaacaacacGGGAAACGTATTGTTGCAGAACGTAAGCCTCTGCGCGcctccgccgccgccacctCCGCCAGCGTCTACGTCCATTGACATGGGTGGAGGCCACGCGACCACGTCATCTTCGTCGTCGTCCCTATCACACTATCATCACCACTCTTCATCGATCGGTGTTTCGACCAACTGCAATCTGAGTTCGGCCGTCGCCACTTCGCTTCACTTACCCGGCAGCTCATCCGAACAGCCTCCTGCATTCAAGACAGAACCTCATCAACATGAAATGATGTTTCCCTATCAGAATCACAATAATGAAATGGCGCCTTCATCGGATGGACTTTTGTCGTCGATATTAAACGATGACGATTTGCAGCTTATGGACCCGTCGATGGGTACAGACGgtggtATGTACCCGGTGAGGATGATGGACACAGCTAGCAGCTCAGTGCCGTGCAACAACAATACAATGAACACCGCAACCATGGTACAAAACGGTAACGCGGGCGGTGGTGACTCGGACAGTGCCGTGAGTTCGATGGGCTCAGAACGCGTGCCCTCGTTGTCTTCGGACACCGAATGGATGGAAACAAATTCAGACAGCGGACACAATGACGGGTACCCGTCGCATTCCAACCAAGAATATGGAAAAATGAGGTGGTTGGACAACTATCTGTATTCCGGAGGTCGTGGTCACTCGGCTGCTCCACAAAAGAAATATCAGTTGTATGGTAGGCGCCTAACAGATTCTTTAtcagCGACCCCGAACGCCACTGAAACGTCAAGGCCTAATCACGTAGGTCTAGTGCCCGATTCATTGAACCTGCCGTATGATATGTCTGTCAGAGAAGGCATCCCAGTGCCCGGCTCTTCACAGTTTAACCGGCACATGGCTGGTTGTTCACGTGTGATGACGCCCGAACACCAAGTGGCTCTTAACCATACGTATGCATTGCCTGTCGAAGGTCCCAGGACACCACGTAACAAGTTCAAGAATAGTAAGAGGAGCGAGGATGAACAACTTACAAGAGACGAAAAGAGGGCCAGAAATCTGAATATTCCTATTAGCGTCGACGACATAATCAATCTGCCCATGGACGAATTTAATGAAAGGTTGTCCAAATACGATCTATCTGAAAgtcaattaacattaattagaGATATTAGGCGTCGAGGAAAAAACAAGgtGGCTGCTCAAAATTGCCGGAAACGTAAGCTGGATCAAATCCTCAGCTTAGCCGATGAAGTAAAACAAATGAAAGACCGAAAGTTCAATCTGTTACAAGAACGTGATTACTTAATGACCGAGCGTGTCAGAGTCAAAACCAAATATGATCTACTTTATAACCATATTTTTGGAAGTTTAAGAGATCCTGACGGAAATCCGTACTCACCATACACTCATACGTTGCGTGAGCAACCCGACGGCAGTGTCAGTATTGTACCAAGAAATAATGGTACCCAAACCGACCGGAACCCTCGGTCTAAGCAACACAAGGAcaagtag
- Protein Sequence
- MMQCYSQPPPSSRHFQGRMGYTRTGNSGMDQRGWQDLATCSPMLAFPVEGQHHHHQSHYGQHPSGALSYPPGPSMYHHPHHHQHHHQHNNHNSNNNTGNVLLQNVSLCAPPPPPPPPASTSIDMGGGHATTSSSSSSLSHYHHHSSSIGVSTNCNLSSAVATSLHLPGSSSEQPPAFKTEPHQHEMMFPYQNHNNEMAPSSDGLLSSILNDDDLQLMDPSMGTDGGMYPVRMMDTASSSVPCNNNTMNTATMVQNGNAGGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHNDGYPSHSNQEYGKMRWLDNYLYSGGRGHSAAPQKKYQLYGRRLTDSLSATPNATETSRPNHVGLVPDSLNLPYDMSVREGIPVPGSSQFNRHMAGCSRVMTPEHQVALNHTYALPVEGPRTPRNKFKNSKRSEDEQLTRDEKRARNLNIPISVDDIINLPMDEFNERLSKYDLSESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQERDYLMTERVRVKTKYDLLYNHIFGSLRDPDGNPYSPYTHTLREQPDGSVSIVPRNNGTQTDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499393; iTF_00340324; iTF_00669990; iTF_00468712; iTF_00308582; iTF_00135055; iTF_01167348; iTF_01432774; iTF_01037486; iTF_01346831; iTF_01330320; iTF_00940118; iTF_01169598;
- 90% Identity
- iTF_00940118;
- 80% Identity
- -