Smay028009.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- cnc
- Assembly
- GCA_034509805.1
- Location
- JASXSY010001982.1:107967-118312[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-16 1.6e-12 48.4 6.3 3 61 451 509 449 513 0.92
Sequence Information
- Coding Sequence
- ATGGGCTACACAAGAACCAGCAACGGCATGGACCAGCGAGGCTGGCAGGACTTGGCATGCAGTCCGATGTTGGCGTTCCCGGGTGAAGGACAACATCACCAGCATCACTACGGGCATCATTCGTCCAACGCGACGCTTAACTACCCGCCCGGGCCGAGCATGTACCATCATCATCAGCATCACCACAACAATGCCGGCAACAACGTGCTATTGCAGAACGTTAGTTTATGCGCGtccccgccgccgccgccaccaccaccgtCGACTTCTATTGATATGGGTAGCAGCCACGCGGCCACATCGTCTTCGACTTCTTCCCTGTCACATTATCACCACCACTCGTCATCCATTGGTGTATCAACCAATTGCAACCTGAGTTCGGCCGTCGCAACTTCGCTTCACTTAGCAGGCAGTTCTGCGGAACAGCCCACCGCGTTCAAGGCGGAACCTCATCAACACGAAATTATGTTTCCCTACCAgAATCACAGTAATGATATGACTCCATCATCGGACGGACTTTTGTCATCGATCCTGAATGACGATGACTTACAACTCATGGATCCGGCGATGGGAGCTGATGGTGGCATGTATCCTGTGCGGATGATGGATAGTGCCAGCAGCTCAGTAGCttgcaacaacaacaacaacaataacaataataacaacacgaTGAGTGGCACGACGATGGTACAAAGCAGTAACGCAGGCGGTGACTCAGACAGTGCTGTCAGTTCAATGGGATCGGAGCGCGTACCTTCCTTGTCTTCGGACACCGAATGGATGGAAACAAATTCGGACAGCGGACACAACGATGGATATCCATCGCATTCCCATCAAGAATACGGaaAAATGAGGTGGTtagacaattatttatattctggaAGTCGCAGTCACTCAGCTGCTCCGCAAAAGAAATACCAGTTGTATGGAAGGCGTTTGACAGATCCCGTATCAGcTGCACCAAATGCTACTGAGACTGCTAGATCAAATCATGTTGGTCTTGTTCCAGATGCATTAAATTTGCCTTATGACATGTCTGTAAGAGAAGGTATCCCCATACCTGGTTCTTCGCAGTTTTCAAGGCACATGGCcggCTGTTCACGAGTAATGACACCTGAACATCAAGTGGCCCTTAATCACACATACGCATTGCCTGTGGAAGGACCCAGGACACCACGTAATAAGCTTAAAAGTTGCAAAAGGAGTGAAGAAGAACAGTTAACTAGAGATGAAAAAAGGGCTAGAAATCTTAACATTCCCATCAGTGTAGATGATATAATCAATCTGCCTATGGATGAATTTAATGAAAGGTTGTCAAAATACGATTTATCTGAAAGCCAGTTAACATTGATCAGAGACATAAGACGTCGTGGAAAAAACAAGGTAGCTGCCCAAAATTGCCGTAAACGTAAATTAGACCAGATTCTTAGTTTGGCTGATGAAGTAAAACAAATGAAAGATCGAAAGTTCAATCTACTTCAAGAACGCGAATACTTAATGACCGAACGTATGAGAGTTAAGACCAAATATGATTTACTTTATAATCATATCTTTGCAagCCTTAGAGATCCTGATGGTAATCCCTATTCGCCATATACTCATACATTGCGTGAACAGCCAGATGGCAGTGTCAGTATTGTACCTAGAAATAATGGGAACCAAACTGACCGTAACCCTCGGTCAAAACAACATAAGGACAAGTAA
- Protein Sequence
- MGYTRTSNGMDQRGWQDLACSPMLAFPGEGQHHQHHYGHHSSNATLNYPPGPSMYHHHQHHHNNAGNNVLLQNVSLCASPPPPPPPPSTSIDMGSSHAATSSSTSSLSHYHHHSSSIGVSTNCNLSSAVATSLHLAGSSAEQPTAFKAEPHQHEIMFPYQNHSNDMTPSSDGLLSSILNDDDLQLMDPAMGADGGMYPVRMMDSASSSVACNNNNNNNNNNNTMSGTTMVQSSNAGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHNDGYPSHSHQEYGKMRWLDNYLYSGSRSHSAAPQKKYQLYGRRLTDPVSAAPNATETARSNHVGLVPDALNLPYDMSVREGIPIPGSSQFSRHMAGCSRVMTPEHQVALNHTYALPVEGPRTPRNKLKSCKRSEEEQLTRDEKRARNLNIPISVDDIINLPMDEFNERLSKYDLSESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQEREYLMTERMRVKTKYDLLYNHIFASLRDPDGNPYSPYTHTLREQPDGSVSIVPRNNGNQTDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135905;
- 90% Identity
- iTF_00468712; iTF_01169598;
- 80% Identity
- -