Cced018049.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- cnc
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001460.1:218875-227423[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9 4.6e+03 -2.2 1.1 17 35 382 400 381 411 0.64 2 2 7.8e-16 7.3e-13 48.4 6.3 3 61 443 501 441 505 0.92
Sequence Information
- Coding Sequence
- ATGGGGAGGATGGGCTACACAAGAACCGGCAACGGTATGGATCAGCGGGGCTGGCAGGACTTGGCCACGTGTAGTCCCATGTTGGCATTTCCAGGCGATGGACAACACCACCAGCATCATCACTACGGACAGCATCCGTCTAGTGCGCTCAACTACCCGCCCGGGACAAGCATGTACTCTCACCACCACAACAACACGGGCAGCGTGCTGTTGCAGAATGTCAGTCTGTGCGCTCCTCCGTCACTGCCACCGCCTCCTACCACTTCCATGGACATGGGCAGCAACCACGTCGTATCTTCATCTTCGTCATCGTCGTCCTTATCACATTATCACCATCACCCTTCGTCCATGGGTGTATCGACCAATTGCAATCTGAGTTCGGCCGTCGCCACTTCGCTACACTTGCCCGGCAGCTCTTCCGAACAACCAGCCCCGTTCAAGACGGAACCCCATCAACATGAAATGATGTTCCCCTATCAGAATCACAATAACGAAATGGCCCCGTCATCGGATGGACTTCTGTCATCAATCTTGAACGACGACGACCTGCAGCTCATAGACCCAGCGATGGGAGCGGACGGTGGTATGTACCCGGTTCAGCGGATGATGGACGCCGCCAGTGGCTCGGTACCGTGCAATAACGCGATGAGCACTACAACCATGGTACAGAACAGCAACGCGGGTGGTGACTCGGACAGCGCCGTCAGTTCAATGGGCTCAGAACGCGTCCCGTCGTTGTCGTCAGACACCGAATGGATGGAAACAAACTCGGACAGTGGAAACAATGACGGATATCCTTCGCACTCACATCAAGAATACGGAAAAATGAGATGGTTGGACAATTATCTGTATTCTGGAAGTCGTGGTCACTCCAGCACTCCACAAAAGAAATATCAATTATATGGAAGACGTATAACAGATTCTGTGACAGGCACACCCAACATCACTGAAGCAGCAAGATCCAATCATGTTGGTCTCGCATCAGATTCAATGAACTTGCCTTATGATATGTCAGTAAGGGATGGTATCCCTGTTCCCGGTTCTTCTCAGTTCACAAGACACATGGCCAGTTGTTCTAGATTAATGACCCCTGACCATCAAGTAGCTCTCAATCACACTTATGCATTGCCAGTAGAAGGTCCTAGGACTTCACGGAATAAACTTAAAAGTAATAAAAGAAGTGAAGAAGAACAACTGACAAGAGATGAAAAAAGGGCTAGAAATCTTAATATTCCCATCAGCGTAGAGGATATAATCAATCTTCCTATGGATGAATTCAACGAGAGGTTATCTAAATATGACTTAACAGAAAGTCAACTAACGTTGATCAGAGATATTAGACGTCGAGGAAAAAATAAAGTGGCAGCTCAAAATTGTAGAAAACGCAAACTAGACCAAATACTCAGCTTAGCTGATGAAGTGAAACAAATGAAAGATCGAAAATTCAATTTATTGCAAGAGCGTGAATACTTAATGACCGAGCGCATGAGAGTAAAGACCAAATATGATTTACTCTATAACCATATTTTTGCAAGTCTAAGAGATCCCGATGGAAACCCTTACTCACCATTCACACATACATTGCGTGAACAACCAGATGGCAGTGTCAGTATTGTACCCAGGAATAATGGGACCCAAACTGACCGAAATCCTCGGTCCAAGCAACACAAGGACAAGTAG
- Protein Sequence
- MGRMGYTRTGNGMDQRGWQDLATCSPMLAFPGDGQHHQHHHYGQHPSSALNYPPGTSMYSHHHNNTGSVLLQNVSLCAPPSLPPPPTTSMDMGSNHVVSSSSSSSSLSHYHHHPSSMGVSTNCNLSSAVATSLHLPGSSSEQPAPFKTEPHQHEMMFPYQNHNNEMAPSSDGLLSSILNDDDLQLIDPAMGADGGMYPVQRMMDAASGSVPCNNAMSTTTMVQNSNAGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGNNDGYPSHSHQEYGKMRWLDNYLYSGSRGHSSTPQKKYQLYGRRITDSVTGTPNITEAARSNHVGLASDSMNLPYDMSVRDGIPVPGSSQFTRHMASCSRLMTPDHQVALNHTYALPVEGPRTSRNKLKSNKRSEEEQLTRDEKRARNLNIPISVEDIINLPMDEFNERLSKYDLTESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQEREYLMTERMRVKTKYDLLYNHIFASLRDPDGNPYSPFTHTLREQPDGSVSIVPRNNGTQTDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135905;
- 90% Identity
- iTF_01499393;
- 80% Identity
- -