Agly011188.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- cnc_1
- Assembly
- GCA_009928515.1
- Location
- scaffold:492276-508246[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-16 8.6e-13 48.2 5.1 3 61 488 546 486 550 0.91
Sequence Information
- Coding Sequence
- ATGATATCCGAAAACGTGTGCCGGTTCGAAGAGGTTCAGCCGTTGGCGTTTTGTAGGAGATTTGATTTGGCTGATTGCAGTTCTCAAGGCAGGATGGGCTACACGAGAACGAGCAACAGTGGAATGGACCAGCGAGGCTGGCAGGACTTGGCTACATGCAGCCCCATGTTAGCGTTCCCGGTCGAAGGACAGCACCACCACCATCAGTCCCATTATGGTCAGCATCCGTCCGGCGCACTCAGTTACCCGCCCGGGCCCAGCATGTATCACCATCCTCATCACCATCAACATCACCACCAACACAACAACCACAACAGCAACAACAACACGGGAAACGTATTGTTGCAGAACGTAAGCCTCTGCGCACCTCTGCCGCCGCCACCTCCGCCAGCGTCTACGTCCATTGACATGGGTGGAGGCCACGCGACCACGTCATCTTCGTCGTCGTCCCTATCACACTATCATCACCACTCTTCATCGATCGGTGTTTCGACCAACTGCAATCTGAGTTCGGCCGTCGCCACTTCGCTTCACTTACCCGGTAGCTCATCCGAACAGCCTCCTGCATTCAAGACAGAACCTCATCAACATGAAATGATGTTTCCCTATCAGAATCACAATAACGAAATGGCGCCTTCATCGGATGGACTTTTGTCGTCGATATTAAACGATGACGATTTGCAGCTTATGGACCCGTCGATGGGTACAGACGGTGGTATGTACCCGGTGAGGATGATGGACACAGCTAGCAGCTCAGTGCCGTGCAACAACAATACAATGAACACCGCAACCATGGTACAAAACGGTAACACGGGTGGTGGTGACTCGGACAGTGCCGTGAGTTCGATGGGCTCAGAACGCGTGCCCTCGTTGTCTTCGGACACCGAATGGATGGAAACAAATTCAGACAGCGGACACAATGACGGGTACCCTTCGCATTCCAACCAAGAATATGGAAAAATGAGGTGGTTGGACAACTATCTGTATTCCGGAGGTCGTGGTCACTCGGCTGCTCCACAAAAGAAATATCAGCTGTATGGTAGGCGCCTAACAGATCCTTTATCAGGGACCCCGAACGCCACTGAAACGTCAAGGCCTAATCACGTCGGTCTAGTGCCTGATTCATTGAACCTGCCGTATGATATGTCCGTCAGAGAAGGCATTCCAGTGCCCGGCTCTTCACAGTTTAACCGGCACATGGCTGGTTGTTCACGTGTGATGACGCCCGAACACCAAGTGGCTCTTAACCATACGTATGCATTGCCTGTCGAAGGTCCCAGGACACCACGTAACAAGTTCAAGAATAGTAAGAGGAGCGAGGATGAACAACTTACAAGAGACGAAAAGAGGGCCAGAAATCTGAATATTCCTATTAGCGTCGACGACATAATCAATCTGCCCATGGACGAATTTAATGAAAGGTTGTCCAAATACGATCTATCTGAAAGTCAATTAACATTAATTAGAGATATTAGGCGCCGAGGAAAAAACAAGGTGGCTGCTCAAAATTGCCGGAAACGTAAGCTGGATCAAATCCTCAGCTTAGCCGATGAAGTGAAACAAATGAAAGACCGAAAGTTCAATCTGTTACAAGAACGTGATTACTTAATGACCGAACGTGTCAGAGTCAAAACCAAATATGATCTACTTTATAACCATATTTTTGGAAGTTTAAGAGATCCTGACGGAAATCCGTACTCACCATACACTCATACGTTGCGTGAGCAACCCGATGGCAGTGTCAGTATTGTACCCAGAAATAATGGTACCCAAACCGACCGGAATCCTCGGTCTAAGCAACACAAGGACAAGTAA
- Protein Sequence
- MISENVCRFEEVQPLAFCRRFDLADCSSQGRMGYTRTSNSGMDQRGWQDLATCSPMLAFPVEGQHHHHQSHYGQHPSGALSYPPGPSMYHHPHHHQHHHQHNNHNSNNNTGNVLLQNVSLCAPLPPPPPPASTSIDMGGGHATTSSSSSSLSHYHHHSSSIGVSTNCNLSSAVATSLHLPGSSSEQPPAFKTEPHQHEMMFPYQNHNNEMAPSSDGLLSSILNDDDLQLMDPSMGTDGGMYPVRMMDTASSSVPCNNNTMNTATMVQNGNTGGGDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHNDGYPSHSNQEYGKMRWLDNYLYSGGRGHSAAPQKKYQLYGRRLTDPLSGTPNATETSRPNHVGLVPDSLNLPYDMSVREGIPVPGSSQFNRHMAGCSRVMTPEHQVALNHTYALPVEGPRTPRNKFKNSKRSEDEQLTRDEKRARNLNIPISVDDIINLPMDEFNERLSKYDLSESQLTLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKQMKDRKFNLLQERDYLMTERVRVKTKYDLLYNHIFGSLRDPDGNPYSPYTHTLREQPDGSVSIVPRNNGTQTDRNPRSKQHKDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135905;
- 90% Identity
- iTF_00940118;
- 80% Identity
- -