Aobl018042.1
Basic Information
- Insect
- Aphidecta obliterata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963966015.1
- Location
- OZ014433.1:17637771-17643019[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-103 1e-98 330.9 35.2 1 300 35 324 35 324 0.94 2 2 0.048 1.2e+03 -1.0 3.0 128 157 347 376 325 399 0.49
Sequence Information
- Coding Sequence
- ATGCGAGAGATAAACCTTCACACAACCCCTTTCGACTCGGTCAGCCATTCGGAATTCGTGAAGCGGGTCGCACCTAAGCCTGCGTTCGAAGATCCCCAAAAAGCTGAAGAAAGACTTCGCGTGAAGAGGCAAGCAAGGGCCGAGGCAAGGGAGATTCGCATGAGAGAGCTGGAGAAGCAACAGAAGGAACAAGAGGAGAATGCCGATCGGCAGTTCGACATGCTTGCCGAACCTGTCGCCAGAACCGCAAGAACTAGCATCAGCAGATACATGTCGAGCCGAAGGAGTTCCGAGGATTCCCTTGAGGACGGGGGGAGTCTCAGGGAATTGAGGCATGAACTCAGAGAAGTAGAGGACAAATTTAGGAAAGCTATGATAACAAATGCTCAACTTGATAACGAAAAATCCGCCCTCACTTATCAAATAGAACTACTTAAAGATAAACTACAGGAACTAGAAGAAGAACAGTCTCAATTGAAAAGAGAACATAAAGAAAAGTGTAGAGAACACGATCAAATGAAGAGGTTATGTACAAAGCTCAAACTCGATCTTGAAGTAACGAAAGCTGAACTAGATGAAAGAGATAAACTCATAACTGAACATGGACTAGTGATAGTGTCTGAGGAACTAGAGGAAACCAACGGTGATATTAGTATGAATAGTGTGGGTACTCCCAAAAAGTCATTAGTGAAGATAGAAAATGCTAAGTTTTTAGAGAATGCCGGAGATGGCTCATTAGATGTTAGACTCTCAAGGTTCATAAAAGACAAACGTGATCTTGAAGATGAAATAAACCATTTAAAATTAGAgttagaagaagaaaaaagtaGAAAGCGAAAATCACATTCTATCAGTACTACCAATGGTCCAGTATCAGATTATGAAACAGAGGGAGATACACAAAAGGATGGAAGTAGCTTATTAGCAGATTATAAGTTCAGAGCTCAAAAGGCCGAACAGGATGTAGCAACCTTACAAGCAACAGTTGCCAGATTGGAAAGTCAAGTCGTCCGATATAAGGCCGCATCTGAGGCTTCCGAAAAGTTAGAAGAAACCCTCAAAACTGAGAAGAGGAAACTTCAAAGAGAAGCTCGAGATGCTGTAAATAGAGCGGAGGAATTAGAAACATCAAATCTGCATTTGCTCAAACGATTGGacaaactgaaaaatgcaaaatcaACACTCTTGAAAGAACTCTGA
- Protein Sequence
- MREINLHTTPFDSVSHSEFVKRVAPKPAFEDPQKAEERLRVKRQARAEAREIRMRELEKQQKEQEENADRQFDMLAEPVARTARTSISRYMSSRRSSEDSLEDGGSLRELRHELREVEDKFRKAMITNAQLDNEKSALTYQIELLKDKLQELEEEQSQLKREHKEKCREHDQMKRLCTKLKLDLEVTKAELDERDKLITEHGLVIVSEELEETNGDISMNSVGTPKKSLVKIENAKFLENAGDGSLDVRLSRFIKDKRDLEDEINHLKLELEEEKSRKRKSHSISTTNGPVSDYETEGDTQKDGSSLLADYKFRAQKAEQDVATLQATVARLESQVVRYKAASEASEKLEETLKTEKRKLQREARDAVNRAEELETSNLHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00646999;
- 90% Identity
- iTF_00349120;
- 80% Identity
- -