Basic Information

Insect: Aphaenogaster floridana
Gene Symbol: -
Assembly: GCA_003063835.1
Location: NJRP01000450.1:27566-32263[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.091 11 7.2 3.1 1 23 395 417 395 417 0.97

2 19 0.016 1.8 9.6 0.5 2 23 454 475 453 475 0.96

3 19 0.00058 0.067 14.1 3.1 1 23 538 560 538 560 0.98

4 19 0.0085 0.99 10.5 1.6 1 23 563 585 563 585 0.98

5 19 3.8e-06 0.00044 21.0 0.7 2 23 633 655 633 655 0.97

6 19 0.0033 0.38 11.8 3.1 1 23 661 683 661 683 0.96

7 19 0.00062 0.071 14.1 0.7 1 20 689 708 689 713 0.94

8 19 7.8e-05 0.0091 16.9 1.1 1 21 787 807 787 809 0.95

9 19 0.0002 0.024 15.6 4.8 1 23 864 886 864 886 0.97

10 19 0.00028 0.032 15.2 0.7 1 20 891 910 891 912 0.94

11 19 0.046 5.3 8.2 0.3 2 23 923 944 923 944 0.97

12 19 2.8e-05 0.0032 18.3 0.6 2 23 983 1004 982 1004 0.97

13 19 2.6e-05 0.003 18.4 1.6 1 23 1009 1031 1009 1031 0.95

14 19 0.0011 0.13 13.3 1.7 1 20 1037 1056 1037 1059 0.93

15 19 4.5e-06 0.00052 20.8 0.4 1 23 1075 1097 1075 1097 0.95

16 19 3.7e-07 4.3e-05 24.2 0.6 1 23 1103 1125 1103 1125 0.99

17 19 4e-05 0.0046 17.8 0.2 1 23 1131 1153 1131 1153 0.97

18 19 0.024 2.7 9.1 6.9 1 23 1159 1181 1159 1181 0.96

19 19 0.005 0.58 11.2 0.6 1 20 1187 1206 1187 1208 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.091	11	7.2	3.1	1	23	395	417	395	417	0.97
2	19	0.016	1.8	9.6	0.5	2	23	454	475	453	475	0.96
3	19	0.00058	0.067	14.1	3.1	1	23	538	560	538	560	0.98
4	19	0.0085	0.99	10.5	1.6	1	23	563	585	563	585	0.98
5	19	3.8e-06	0.00044	21.0	0.7	2	23	633	655	633	655	0.97
6	19	0.0033	0.38	11.8	3.1	1	23	661	683	661	683	0.96
7	19	0.00062	0.071	14.1	0.7	1	20	689	708	689	713	0.94
8	19	7.8e-05	0.0091	16.9	1.1	1	21	787	807	787	809	0.95
9	19	0.0002	0.024	15.6	4.8	1	23	864	886	864	886	0.97
10	19	0.00028	0.032	15.2	0.7	1	20	891	910	891	912	0.94
11	19	0.046	5.3	8.2	0.3	2	23	923	944	923	944	0.97
12	19	2.8e-05	0.0032	18.3	0.6	2	23	983	1004	982	1004	0.97
13	19	2.6e-05	0.003	18.4	1.6	1	23	1009	1031	1009	1031	0.95
14	19	0.0011	0.13	13.3	1.7	1	20	1037	1056	1037	1059	0.93
15	19	4.5e-06	0.00052	20.8	0.4	1	23	1075	1097	1075	1097	0.95
16	19	3.7e-07	4.3e-05	24.2	0.6	1	23	1103	1125	1103	1125	0.99
17	19	4e-05	0.0046	17.8	0.2	1	23	1131	1153	1131	1153	0.97
18	19	0.024	2.7	9.1	6.9	1	23	1159	1181	1159	1181	0.96
19	19	0.005	0.58	11.2	0.6	1	20	1187	1206	1187	1208	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATAAATACGTCGGGTCCGCCGCAAGGCGAGGACGCGATCGCGGCCGCGGTGAAGATATGCCGCGTCTGCCTGCTCGACAACCTGATGATGCGCGACCTCTTCGTGGAGAGCGAGGTCGCGTCCCTGTCTGCGAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTCTACCAGCACAGGTGTGCTGTGTGTGCGCCGACAAACTGGAGTCGGCGTACGAGTTTAAATTACAAGTGGAGCAAGCCGACAGTGTTCTTCGAGAGAGGCTCGTTGGAGGAATAATAAAGGAGGAGTTGTTTCTTAATGAGGTTGAAATACACTTGGACGCCGAGAGAAATGACGATATGGATGATATAAACGTCAGTACTGATTACGAATCTACCACCGAGGTGCTGCCAATGGAATCGGAAACTGACAAGAACTTCCTGAAAGATCAGTTAATGATCTTGGAAGCTGAAAAATTGGCAGAAACAGAAGGAATGCAACAAGACCCGGAACAAGATAACTCGCAAGAAGTTAGTCAAGACATTGCAGAAGAGTTGCAGCAAGAATTAGCCAGCGCGGAAGACAATGATATGTCAGATGCTATCGAGGAATCTAGGGATGAAGAACCTAGCGACGAGACTATTATTCGAAATTGCACAGAAGCAATTCCAACAGAGGAACATGATTATATTATGCAACAACAGTGTATATTGCCTGCTAAGCAACTCTCATTGCAGGAAGAAATGCAGGAGAATGTACCAGAACTTGAACAAGACACAGTAGAATACCAAAAGACACCATCTGAACAAAACCAAGAAATTCAGGCTGATCAAAATCAAGAGATTCAAGCTCAGCAAATTTATGAGATTCAGGCTGAGCAAATCCAAGAGACTAAATTTCAGACTGAACTAAAGCAAGAAGATCAAGCTGAACAAGTTCAGGAGAATCAAGCTGagcaaaatcaaaattacaagGAGGAAACGCCCAAAGCTGATACTAGTGAGCCAATAGTGGAACAAGAATCATCCCAGAATGAAACTAGAAGAAGTAAACGTAGATTAACTCGCCGGATATTCACCGAGCGGGATTCCGATGAGGAAAATTACTTCGAAAATCTGAATCTTAGTTCTCGATTGAAGAAAGCGCAGGCGGATAAGACGGAGAAGATCTTTTTCATGTGTTACTTGTGCGACAAGCAATTCCTTTCAAAGAACGTCCTGAAAGAACATATGCATTCCCACGAAGAAGTGAGGAAGACGCTGTCCCTGAAGAAAACGCCGGAGAAACCGCAGAAGGTACAGACCAGTGTTTCCGTTGTGAAGACGCCGCCATCCGGAAAGAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCGTTTACTAAACATATTAAGCAACACGAGCGAGAGGAAGCGAAGGAGGATCCGATGCCGCTCGAGATATCGTTCCATGAGGATGAGCATAGTCTAGACTTCGATAACGGCAACAAATTAGAAGGCAGAAAACGAAGAAGAGGAAGTACAGCCGATGACATCGCGAGCGATAACGATCAGGATAAAAGAAGAAAGTATAATTCTGTTGAGGAGTTTACATGTGATAAATGTCCAGAAAAATTCGATACAAAGCGAGGCTTGCATAAGCACTCTCTCACACACGTTAGCTTCAAATGCAGCGTGTGCAACGACGAATACAACACTCTGGAACAATTGAGAAATCATCGAACGAAGCATGTGGTCGAGGGCGTGCTTATTGAGCAAGACTTGGAAGAGGACATAAAACAGATGACCAAGAGCGAAAATAACGATGAAGACAACAAAAATATTGAGGATGAGGAGAACAACGACGAATCCGCCGAAAACATGAAAGAACCCAAGTGTCCGACGTGTTCAATGACATTCTCACGCAAGAAAGCACTGGCCAGACACATGGAGACAGCACACTCCAGCGCCCGCTCTTACGAATGCAAGATATGTTGTCAACAATTCACACGGAAGGATCTCCTGCGCAGGCATGCCGAGCAGCACGCACGAGTGAAGACCTACAAATGTACCCAATGCAACAAGACCTTCGGCAACGAGCTCACTCTGAGAAATCATCTGGTCGCTACAAATCACAAGACATTCATACATGGGCAGGAATACGATCCTAACAAGCGTATAAAGCGCGTGGCCGCGAGAGCGGCGCAGAAGATCATTGATAAGATCAAGACCGAGGATGGTCTCGAGGATTACGACGATGATAACGATGACAATACCGATTACGACGCCAAGTTGGACGGACATTATCGCCGTAAACGCGATGCTACACCAAAGAAGTACAATCATAAGAAGGAATTTGAGTGTGCGACCTGTAACAAGAAGTACAGCTCGAAGCAAGCATTGACGAAGCATATGCAGCCGCATGTGAAAGAGGAGAAAGCAGAGAAAGCGGCGGAAAAGGCGGCAGAGAAGCAGAAGAAAGCTGCTTTGGAGAAGAAGGAGCCGCAAAAGACAAGCAACACgggcgatgacgacgacgataacgacTCCGATTTTGAGAGTGGCCTCGACTGGCCGATGGACAGTCATGAATGCAGCACGTGCAAGAAACGATACAGCACGAAGAAATCGCTGCTGCGTCACCAGCTATTGCACGAAGAGCCGAACTTTGAATGCGACATCTGCAATGTTAAATTCTATCGCAAAGATAAGCTGAAGGCGCACTATGACAAATGCTCGGAGAAAAATCCTGACCAAGTGAGAAAGTGCAACATCTGCGGCGATAGTTTCGAGAACAATGAGATCCTGCGCGAGCACAGGGCCAAGCACGTCATCGAGGGTATCTTAACGGAGGAGGATTTAAGGGATATCGAGCCGAAGTCCGAGGAGAAGAAGCCGGGCGAGAAGATCGGTCGAAAGAGGAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAGTACACCTCCAGGAAGGGCCTGCTGCGGCACATCCAGGTGCACGAAGGCAAGAAGTACCTATGCGACATATGCCCGAAGAAGTTCTACCGACGGGAACACTTGAAGATCCACGTGGCCAAGCACAACATGATTAAACCATACAAGTGCACCCGCTGCACCAAGCGCTTTATCAAGGAAGAGCAGCTTAACAATCATCTGCCCAAGCACGATCGCACTTTTAAGAAGAGCAAGGAGACCGACAGCTCGAAGAGATTCCTCTGTGAGATCTGCAGTAAGAGCTTCACGCAATCGACGACGTTGATAGCGCATCTGCGCGCTCACAACGGTATCAAACCGTACGTGTGCGAGGTATGTTCCAGGCCGTTCACTACCAACGCCTACTTGAAGATGCATATGCGTACGCACACGCAGGAACGCCCGTACATCTGCCAATACTGTTCGCGAGCGTTCGCGCGTGCCGATACCTTGGCGAATCATCTGACATCGCATACTGGCGAAGCCAAGTATCACTGCAAGTGCTGTCCGAAGAACTTCCGGCGATTAAAGTCGTTAAAGGAACACATGTTTATCCACACCGGTCAGCGACCTTACGAGTGTCCAACTTGCGACAGGAAGTTCAACAACAACGGCAGCCGCTATGCACACAGCAAGCGATGCAAACAGAATCTTTTGCAGAATCAGAACCGGGCGCAACAGATGATCCAACAGACGCAGCAGCAGCATCAACAGCAGCACCAGCAGCAGCCGCAGCAAGTGCAGATACAGGTACAGCAGTCGCAGCCACATCCGGTCAGGCTGCATCAAACCACGATTGGCCAAGCGCAAATAGTCAAGGCGCAGAATATCAAGACGATCGCTATAGCGAGACAAGCTGAGCCTACCACGGCACAAGTCATGCAGCATCAGGAGATACTGATGCCTTTAATCCTGCCTCTTACCGTCACTCTCACCGACGTAGGCGAGGAGGTGATACTACCCGAGGGTACAAAGATATTCACCACCTCCTAA
Protein Sequence: MDAVEINTSGPPQGEDAIAAAVKICRVCLLDNLMMRDLFVESEVASLSAKAMSFANVKMLPGDGLPAQVCCVCADKLESAYEFKLQVEQADSVLRERLVGGIIKEELFLNEVEIHLDAERNDDMDDINVSTDYESTTEVLPMESETDKNFLKDQLMILEAEKLAETEGMQQDPEQDNSQEVSQDIAEELQQELASAEDNDMSDAIEESRDEEPSDETIIRNCTEAIPTEEHDYIMQQQCILPAKQLSLQEEMQENVPELEQDTVEYQKTPSEQNQEIQADQNQEIQAQQIYEIQAEQIQETKFQTELKQEDQAEQVQENQAEQNQNYKEETPKADTSEPIVEQESSQNETRRSKRRLTRRIFTERDSDEENYFENLNLSSRLKKAQADKTEKIFFMCYLCDKQFLSKNVLKEHMHSHEEVRKTLSLKKTPEKPQKVQTSVSVVKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREEAKEDPMPLEISFHEDEHSLDFDNGNKLEGRKRRRGSTADDIASDNDQDKRRKYNSVEEFTCDKCPEKFDTKRGLHKHSLTHVSFKCSVCNDEYNTLEQLRNHRTKHVVEGVLIEQDLEEDIKQMTKSENNDEDNKNIEDEENNDESAENMKEPKCPTCSMTFSRKKALARHMETAHSSARSYECKICCQQFTRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFIHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDDNDDNTDYDAKLDGHYRRKRDATPKKYNHKKEFECATCNKKYSSKQALTKHMQPHVKEEKAEKAAEKAAEKQKKAALEKKEPQKTSNTGDDDDDNDSDFESGLDWPMDSHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVIEGILTEEDLRDIEPKSEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLNNHLPKHDRTFKKSKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQMIQQTQQQHQQQHQQQPQQVQIQVQQSQPHPVRLHQTTIGQAQIVKAQNIKTIAIARQAEPTTAQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00126152;
90% Identity: iTF_00126152; iTF_00127671; iTF_00129173; iTF_00129923; iTF_00128413;
80% Identity: -