Basic Information

Insect: Aphaenogaster fulva
Gene Symbol: -
Assembly: GCA_003063765.1
Location: NJRO01000520.1:39592-44305[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.077 9.2 7.3 3.1 1 23 396 418 396 418 0.97

2 15 0.013 1.6 9.8 0.5 2 23 455 476 454 476 0.96

3 15 0.014 1.7 9.7 5.2 1 23 539 561 539 561 0.97

4 15 0.0072 0.86 10.6 1.6 1 23 564 586 564 586 0.98

5 15 6.9e-06 0.00083 20.1 0.5 2 23 634 656 634 656 0.97

6 15 0.0028 0.33 11.9 3.1 1 23 662 684 662 684 0.96

7 15 0.00052 0.062 14.2 0.7 1 20 690 709 690 714 0.94

8 15 6.6e-05 0.0079 17.0 1.1 1 21 788 808 788 810 0.95

9 15 0.00017 0.021 15.7 4.8 1 23 865 887 865 887 0.97

10 15 0.00023 0.028 15.3 0.7 1 20 892 911 892 913 0.94

11 15 0.039 4.7 8.3 0.3 2 23 924 945 924 945 0.97

12 15 2.4e-05 0.0028 18.4 0.6 2 23 984 1005 983 1005 0.97

13 15 2.2e-05 0.0026 18.5 1.6 1 23 1010 1032 1010 1032 0.95

14 15 0.00092 0.11 13.4 1.7 1 20 1038 1057 1038 1060 0.93

15 15 0.11 13 6.8 1.0 1 14 1076 1089 1076 1092 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.077	9.2	7.3	3.1	1	23	396	418	396	418	0.97
2	15	0.013	1.6	9.8	0.5	2	23	455	476	454	476	0.96
3	15	0.014	1.7	9.7	5.2	1	23	539	561	539	561	0.97
4	15	0.0072	0.86	10.6	1.6	1	23	564	586	564	586	0.98
5	15	6.9e-06	0.00083	20.1	0.5	2	23	634	656	634	656	0.97
6	15	0.0028	0.33	11.9	3.1	1	23	662	684	662	684	0.96
7	15	0.00052	0.062	14.2	0.7	1	20	690	709	690	714	0.94
8	15	6.6e-05	0.0079	17.0	1.1	1	21	788	808	788	810	0.95
9	15	0.00017	0.021	15.7	4.8	1	23	865	887	865	887	0.97
10	15	0.00023	0.028	15.3	0.7	1	20	892	911	892	913	0.94
11	15	0.039	4.7	8.3	0.3	2	23	924	945	924	945	0.97
12	15	2.4e-05	0.0028	18.4	0.6	2	23	984	1005	983	1005	0.97
13	15	2.2e-05	0.0026	18.5	1.6	1	23	1010	1032	1010	1032	0.95
14	15	0.00092	0.11	13.4	1.7	1	20	1038	1057	1038	1060	0.93
15	15	0.11	13	6.8	1.0	1	14	1076	1089	1076	1092	0.86

Sequence Information

Coding Sequence: ATGGACGCCGTGGAGATAAATACGTCGGGTCCGCCGCAAGGCGAGGACGCGATCGCGGCCGCGGTGAAGATATGCCGCGTCTGCCTGCTCGACAACCTGATGATGCGCGACCTCTTCGTGGAGAGCGAGGTCGCGTCCCTGTCTGCGAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTCTACCAGCACAGGTGTGCTGTGTGTGCGCCGACAAACTGGAGTCGGCGTACGAGTTTAAATTACAAGTGGAGCAAGCCGACAGTGTTCTTCGAGAGAGGCTCGTTGGAGGAATAATAAAGGAGGAGTTGTTTCTTAATGAGGTTGAAATACACTTGGACGCCGAGAGAAATGACGATATGGATGATATAAACGTCAGTACTGATTACGAATCTACCACCGAGGTGCTGCCAATGGAATCGGAAGCTGACAAGAACTTCCTGAAAGATGAGTTAATGATCTTGGAAGCTGAAAAATTGGCAGAAACAGAAGGAATGCAACAAGACCCGGAACAAGATAACTCGCAAGAAGTTAGTCAAGACATTGCGGAAGAGTTGCAGCAAGAATTCGCCAGCGCGGAAGACAATGATATGTCAGATGCTATCGAGGAATCTAGGGATGAAGAACCTTCTAGCGACGAGACTATTATTCGAAATTGCACAGAAGCAATTCCAACAGAGGAACATGATTATATTATGCAGCAACAGTGTATATTGCCTGCTGAGCAACTCTCATTGCAGGAAGAAATGCAGGAGAGTGTACCAGAACTTGAACAAGACACAGTAGAATACCAAGAGACACCATCTGAACAAAACCAAGAAATTCAGGCTGATCAAAATCAAGAGATTCAAGCTCAGCAAATTTATGAGATTCAGGCTGAGCAAAACCAAGAGACTAAATTTCAGACTGAACTAAAGCAAGAAGATGAAGCTGAACAAGTTCAGGAGAATCAAGCTGAGCAAAATCAAAATGACAAGGAGGAAACGCCCAAAGCTGATACTAGTGAGCCAATAGTGGAACAAGAATCATCCCAAAATGAAACTAGAAGAAGTAAACGTAGATTAACTCGCCGGATATTCACCGAGCGGGATTCCGATGAGGAAAATTACTTCGAAAATCTGAATCTTAGTTCTCGATTGAAGAAAGCGCAGGCGGATAAGACGGAGAAGATCTTTTTCATGTGTTACTTGTGCGACAAGCAATTCCTTTCAAAGAACGTCCTGAAAGAACATATGCATTCCCACGAAGAAGTGAGGAAGACGCTGTCCCTGAAGAAAACGCCGGAGAAACCGCAGAAGGTACAGACCAGTGTTTCCGTTGTGAAGACGCCGCCATCCGGAAAGAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCGTTTACTAAACATATTAAGCAACACGAGCGAGAGGAAGCGAAGGAGGATCCGATGCCGCTCGAGATATCGTTCCATGAGGATGAGCATAGTCTAGACTTCGATAACGGCAACAAATTAGAAGGCAGAAAACGAAGAAGAGGAAGTACAGCCGATGACATCGCGAGCGATAGTGATCAGGATAAAAGAAGAAAGTATAATTCTGTTGAGGAGTTTACATGTGATAAATGTCCAGAAAAATTCGATACAAAGCGACGCTTGCATAAGCACTCTTTCACACACGTTAGCTTCAAATGCAGCGTGTGCAACGACGAATACAACACTCTGGAACAATTGAGAAATCATCGAACGAAGCATGTGGTCGAGGGCGTGCTTATCGAGCAAGACTTGGAAGAGGACATAAAACAGATGACCAAGAGCGAAAATAACGATGAAGACAACAAAAATATTGAGGATGAGGAGAACAACGACGAATCCGCCAAAAACATGAAAGAACCCAAGTGTCCGACGTGTTCAATGACATTCTCACGCAAGAAAGCACTGGCCAGACACATTGAGACAGCACACTCCAGCGCCCGCTCTTACGAATGCAAGATATGCTGTCAACAATTTACACGGAAGGATCTCCTGCGCAGGCATGCCGAGCAGCACGCACGAGTGAAGACCTACAAATGTACCCAATGCAACAAGACCTTCGGCAACGAGCTCACTCTGAGAAATCATCTGGTCGCTACAAATCACAAGACATTCATACATGGGCAGGAATACGATCCTAACAAGCGTATAAAGCGCGTGGCCGCGAGAGCGGCGCAGAAGATCATTGATAAGATCAAGACCGAGGATGGTCTCGAGGATTACGACGACGATAACGATGACAATACCGATTACGACGCCAAGTTGGACGGACATTATCGCCGTAAACGCGATGCTACACCAAAGAAGTACAATTATAAGAAGGAATTTGAGTGTGCGACCTGTAACAAGAAGTACAGCTCGAAGCAAGCATTGACGAAGCATATGCAGCCGCATGTGAAAGAGGAGAAAGCAGAGAAAGCGGCGGAAAAGGCGGCAGAGAAGCAGAAGAAAGCTGCTTTGGAGAAGAAGGAGCCGCAAAAGACAAGCAACACgggcgatgacgacgacgataacgacTCCGATTTTGAGAGTGGCCTCGACTGGCCGATGGACAGTCATGAATGCAGCACGTGCAAGAAACGATACAGCACGAAGAAATCGCTGCTGCGTCACCAGCTATTGCACGAAGAGCCGAACTTTGAATGCGACATCTGCAATGTTAAATTCTATCGCAAAGATAAGCTGAAGGCGCACTATGACAAATGCTCGGAGAAAAATCCTGACCAAGTGAGAAAGTGCAACATCTGCGGCGATAGTTTCGAGAACAATGAGATCCTGCGCGAGCACAGGGCCAAGCACGTCATCGAGGGTATCTTAACGGAGGAGGATTTAAGGGATATCGAGCCGAAGTCCGAGGAGAAGAAGCCGGGCGAGAAGATCGGTCGAAAGAGGAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAGTACACCTCCAGGAAGGGCCTGCTGCGGCACATCCAGGTGCACGAAGGCAAGAAGTACCTATGCGACATATGCCCGAAGAAGTTCTACCGACGGGAACACTTGAAGATCCACGTGGCCAAGCACAACATGATTAAACCATACAAGTGCACCCGCTGCACCAAGCGCTTTATCAAGGAAGAGCAGCTTAACAATCATCTGCCCAAGCACGATCGCACTTTTAAGAAGAGCAAGGAGACCGACAGCTCGAAGAGATTCCTCTGTGAGATCTGCAGTAAGAGCTTCACGCAATCGACGACGAAGTTCAACAACAACGGCAGCCGCTATGCACACAGCAAGCGATGCAAACAGAATCTTTTGCAGAATCAGAACCGGGCGCAACAGATGATCCAACAAACGCAGCAGCAGCATCAACAGCAGCACCAGCAGCAGCCGCAGCAAGTGCAGATACAGGTGCAGCAGTCGCAGCCGCATCCGGTCAGGCTGCATCAAACCACGATTGGCCAAGCGCAAATAGTCAAGGCGCAGAATATCAAGACGATCGCTATAGCGAGACAAGCTGAGCCTACCACGGTGGCCACGGCACAACAAGTCATGCAGCATCAGGAGATACTGATGCCTTTAATCCTGCCTCTTACCGTCACTCTCACCGACGTAGGCGAGGAGGTGATACTACCCGAGGGTACAAAGATATTCACCACCTCCTAA
Protein Sequence: MDAVEINTSGPPQGEDAIAAAVKICRVCLLDNLMMRDLFVESEVASLSAKAMSFANVKMLPGDGLPAQVCCVCADKLESAYEFKLQVEQADSVLRERLVGGIIKEELFLNEVEIHLDAERNDDMDDINVSTDYESTTEVLPMESEADKNFLKDELMILEAEKLAETEGMQQDPEQDNSQEVSQDIAEELQQEFASAEDNDMSDAIEESRDEEPSSDETIIRNCTEAIPTEEHDYIMQQQCILPAEQLSLQEEMQESVPELEQDTVEYQETPSEQNQEIQADQNQEIQAQQIYEIQAEQNQETKFQTELKQEDEAEQVQENQAEQNQNDKEETPKADTSEPIVEQESSQNETRRSKRRLTRRIFTERDSDEENYFENLNLSSRLKKAQADKTEKIFFMCYLCDKQFLSKNVLKEHMHSHEEVRKTLSLKKTPEKPQKVQTSVSVVKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREEAKEDPMPLEISFHEDEHSLDFDNGNKLEGRKRRRGSTADDIASDSDQDKRRKYNSVEEFTCDKCPEKFDTKRRLHKHSFTHVSFKCSVCNDEYNTLEQLRNHRTKHVVEGVLIEQDLEEDIKQMTKSENNDEDNKNIEDEENNDESAKNMKEPKCPTCSMTFSRKKALARHIETAHSSARSYECKICCQQFTRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFIHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDDNDDNTDYDAKLDGHYRRKRDATPKKYNYKKEFECATCNKKYSSKQALTKHMQPHVKEEKAEKAAEKAAEKQKKAALEKKEPQKTSNTGDDDDDNDSDFESGLDWPMDSHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVIEGILTEEDLRDIEPKSEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLNNHLPKHDRTFKKSKETDSSKRFLCEICSKSFTQSTTKFNNNGSRYAHSKRCKQNLLQNQNRAQQMIQQTQQQHQQQHQQQPQQVQIQVQQSQPHPVRLHQTTIGQAQIVKAQNIKTIAIARQAEPTTVATAQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00126152;
90% Identity: iTF_00126903;
80% Identity: -