Aepo001867.1
Basic Information
- Insect
- Apamea epomidion
- Gene Symbol
- retn
- Assembly
- GCA_947507525.1
- Location
- OX382242.1:7253671-7258789[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-20 9.2e-17 61.6 0.0 15 89 13 85 6 85 0.94 2 2 5.4 1.1e+04 -2.7 0.0 25 38 213 226 175 228 0.58
Sequence Information
- Coding Sequence
- ATGTCGTATAAAATTGTGATTAATGTCTCCCAAAGGGATACAGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAATTGTACAACCTAGTGATTGCTCGCGGTGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCATCCATCACATCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGATTACGAGTGCGAGAAGAAGAACCTTTCAACTAGGAGCGAGCTAGATGCAGCCATTGAAGGGAACAAGCGCGAGGGTCGCCGCGCATCGGGACAGTACGACGCACAGGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTGGGAGGTGTCGCACCACGCTTACCGCCGCTGCCGCCGCACGCACCGCACCTCGCTCAGCACGACCTCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCACCCCCTAGCAATGGTCCTGCTCCAATAATGTCTCCTCGCGACGCAGCAGCCCTCAGTGCCATCGACGTCTCCCGTCTCACTCTCTGGTCGCTCTACAATAATAACAACAACAATAGCCCACAACCCGACCTAGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCCCTGACGAGCGGCGGGAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCGCTGTCGCGGCCCCCCTCGCCGCGCTCCGACCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACACCACTTCACCGCCACAGATCAACGGCATGCCCAATTCCAATGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGGGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAACTGAACGGAGTAACATATGAAGGAGTACTCTTTCCTTCAGGAAGCGGTCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MSYKIVINVSQRDTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDLEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPLSRPPSPRSDHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_00122137;