Acre022954.2
Basic Information
- Insect
- Apamea crenata
- Gene Symbol
- retn
- Assembly
- GCA_949629185.1
- Location
- OX451369.1:11869140-11876579[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 4e-16 60.2 0.0 17 89 9 79 5 79 0.95 2 2 5.2 1.6e+04 -2.7 0.0 25 38 207 220 169 222 0.58
Sequence Information
- Coding Sequence
- ATGGTAATTGATTGTATTCTTCTTGGCACTCCAATAAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAATTGTACAACCTAGTGATTGCTCGCGGTGGCCTGGTGGAGGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGACTGCGGCTGCCGTCATCCATCACATCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTTTCAACTAGGAGCGAGCTGGACGCAGCCATTGAAGGGAACAAGCGCGAGGGTCGCCGCGCATCGGGACAGTACGACGCACAAGCTGCTTTAGCTatgCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTAGGAGGTGTCGCACCACGCTTGCCGCCGCTgccgccgcacgcgccgcacctCGCGCAGCATGACCTCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAACAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCGCCCCCTAGCAATGGTCCTGCTCCAATAATGTCTCCTCGCGACGCAGCAGCCCTCAGTGCCATCGACGTTTCCCGTCTCACTCTCTGGTCGCTctacaataataacaacaacaacagcccACAACCCGACCTCGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCCCTCACGAGCGGCGGCAAGCGCGAGGCGTGCCgctcgcccgcgccgcccgccaagcgccgcacgccgcgcccgcTGTCGCGCCCCCCCTCGCCGCGCTCCGACCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACACCACTTCACCGCCACAGATCAACGGCATGCCCAATTCCAATGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGGGGAGACGCGAGCACAGGAGACCAGCAACTGGTAGTATCAATAGAACTGAACGGAGTAACATATGAAGGAGTACTCTTTCCCTCAGGAAGCGGTCAGAACGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MVIDCILLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDLEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPLSRPPSPRSDHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_00123133;