Basic Information

Insect: Anorthoa munda
Gene Symbol: -
Assembly: GCA_945859655.1
Location: CAMAOM010001173.1:1170110-1174779[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0013 0.16 13.6 0.0 2 23 39 61 38 61 0.96

2 16 0.78 93 4.9 0.1 3 23 89 110 89 110 0.92

3 16 0.13 16 7.4 3.2 2 23 133 154 132 154 0.94

4 16 0.00039 0.046 15.3 1.9 1 21 158 178 158 181 0.91

5 16 0.012 1.4 10.6 0.1 3 20 187 204 186 206 0.92

6 16 0.0045 0.54 12.0 4.3 1 23 213 236 213 236 0.94

7 16 0.00011 0.013 17.1 0.6 1 23 244 267 244 267 0.93

8 16 0.66 79 5.1 0.2 2 23 311 333 310 333 0.94

9 16 0.66 79 5.1 1.1 3 23 359 380 357 380 0.92

10 16 1.2e-05 0.0014 20.0 0.4 1 23 428 451 428 451 0.96

11 16 0.044 5.2 8.8 0.5 3 20 458 475 457 477 0.93

12 16 7.4 8.8e+02 1.8 6.3 3 23 486 507 484 507 0.89

13 16 0.00095 0.11 14.1 1.5 1 23 514 537 514 537 0.96

14 16 0.0018 0.22 13.2 2.0 1 23 542 564 542 564 0.96

15 16 5.3e-06 0.00063 21.2 0.4 1 20 570 589 570 592 0.94

16 16 1.8e-05 0.0021 19.5 3.1 1 23 598 621 598 621 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0013	0.16	13.6	0.0	2	23	39	61	38	61	0.96
2	16	0.78	93	4.9	0.1	3	23	89	110	89	110	0.92
3	16	0.13	16	7.4	3.2	2	23	133	154	132	154	0.94
4	16	0.00039	0.046	15.3	1.9	1	21	158	178	158	181	0.91
5	16	0.012	1.4	10.6	0.1	3	20	187	204	186	206	0.92
6	16	0.0045	0.54	12.0	4.3	1	23	213	236	213	236	0.94
7	16	0.00011	0.013	17.1	0.6	1	23	244	267	244	267	0.93
8	16	0.66	79	5.1	0.2	2	23	311	333	310	333	0.94
9	16	0.66	79	5.1	1.1	3	23	359	380	357	380	0.92
10	16	1.2e-05	0.0014	20.0	0.4	1	23	428	451	428	451	0.96
11	16	0.044	5.2	8.8	0.5	3	20	458	475	457	477	0.93
12	16	7.4	8.8e+02	1.8	6.3	3	23	486	507	484	507	0.89
13	16	0.00095	0.11	14.1	1.5	1	23	514	537	514	537	0.96
14	16	0.0018	0.22	13.2	2.0	1	23	542	564	542	564	0.96
15	16	5.3e-06	0.00063	21.2	0.4	1	20	570	589	570	592	0.94
16	16	1.8e-05	0.0021	19.5	3.1	1	23	598	621	598	621	0.97

Sequence Information

Coding Sequence: ATGCCAATATCAGACCTAACCGTGTTCGATTCGTTGTTCGAAGCGAGACAAAACGCTAAACTCATTTTGAGGCACACTACGGCTTATCCATTCAAGATCCCCGGGAACGAAATGGTTTGTGTTTACTGCGGCGATGCCTTTGGAGAACCGGAAGCCTTTAGAAAACACATGAGAACCGAGCACTACCAGCCAAACGTCAAACATGCATTTGCACACACTATGGGGACAGAGGAATCCCTTAAAACTGACTGTACAGATTTAGGATGCAAGCTCTGCGCTAAAAAATTCGATTCCCTAGCTTCCATAGCCGAACATCTTGTTGTAGAACATGACAAGCATATAAATCTAGACGCAGAGACTGGATTACAGACTTTCAAACTAGGTCGCGAAAGATGGGTGTGCGCTACCTGCCACCAGAAATTCCCGTCTCTGAGATGCCTATCTCGACACAACAGCATACACTACCATAAGTACACGTGCGAGACTTGCGGCAAGTCATACCTTAGTCGGGACAACCTGAAGAAGCATGTATTCTTCAGCCATACGGAGAAAAAGATATGTACTAAGTGCAAGAAGTCCTTTCCCAATCTCGAGGAGCGGCGCGCACATGTCTTAGCTAGCAAAAGGTGCTGGCCTTATTGCTGTAACGTCTGTGGCCACAGATTCGTCACCAAAAAGCTTAGGACTCAGCACATGACCGAAGCCCACAACGTAGACACGAACAAGCGCTACAACTGTCCTGAATGTCAGGAGTCTTTCACGGATTCCAGACTATATAGAACACACTACGTGGTAACCCATACAGATGATAACTTCGTCTGCCAATGCTGTGAGAAGCAAAATGACCCCAATTTCATCTCGAAACGGAACGCCGAGATTATTGTGAAATATTCCACCGTATACCCCTTCAAGCTGCCCGAAGACAATATGGTTTGTGTTTACTGTTGCGAAACCTATCCGGACCCCGCAGTGTTCAGAACCCACATGAACGAAGAACATGAAACTTTTAACCCCAAAATGGCCTTCGTCCATTGCTCAGAAGGGTACATAAAAGTTGACTGCACCAATATCAATTGTAGACTCTGCTTCAAACACTTCCAGAATTTGGACCAAATAGCAGATCATCTGTACTCCGAACATAAGAAGCCTCTTGACCTAACCGTCGCTTTAGGACTGCAACCATTCAAGTTAGAAAACAATAAACTTTTCTGCGCGATATGCCACTACAAAGCCGTATGCTTACGCCAGTTAAGCAGACACACTCAGAGCCATTTCTGGAGATACACCTGCGAAGCTTGCGGAAAATCTTACGCGACAAACACAGCCCTCCGGAGTCATATACGATTCTCGCACATTGGAACCGAAAAGATATGTCGCAAATGTAAACGGACCTTCTCTTCAATTGAAGAGAGGAGAAAACATTTGCTGGAGTCCCAAAAATGCTGGTCGCATTTGTGCTGTGTTTGCGGAGAGAGATTCATGTCTTGGCACGCTAAGCAGTTGCATTTGACAGAGTGCCACGGCGTTGAAAAAAAAGTTTACATGTGCCCCGAATGTGGACAGACCTTCCAAGAACGCAAGAAGTATAGGATACATTTCAGGCTTACACATACTGATGACAACTATGTGTGTTCCTGCTGCGGCATGAAATTCGTAACCAAAAAGAATTTAGAAGAACACAGAGTCTCACACACAATGGAAAAACTCTTTCCTTGTACTGTCTGCTCGAAATCGTTCCCTAGGAAGAAGAATTTGATACAGCACATGTGGATACATATGGAACATAAACGATTTGAGTGTAAACTATGCAACAAAAAGTTCAATCAAAAAGTCAGTTGGAAAACGCATATGAAATCGTACCATCCGGACTTAGAGGATTTAGATGGGAAAAATGATAATCTAAAACTTATGTTTTCAGTTTTAAGTGAATAA
Protein Sequence: MPISDLTVFDSLFEARQNAKLILRHTTAYPFKIPGNEMVCVYCGDAFGEPEAFRKHMRTEHYQPNVKHAFAHTMGTEESLKTDCTDLGCKLCAKKFDSLASIAEHLVVEHDKHINLDAETGLQTFKLGRERWVCATCHQKFPSLRCLSRHNSIHYHKYTCETCGKSYLSRDNLKKHVFFSHTEKKICTKCKKSFPNLEERRAHVLASKRCWPYCCNVCGHRFVTKKLRTQHMTEAHNVDTNKRYNCPECQESFTDSRLYRTHYVVTHTDDNFVCQCCEKQNDPNFISKRNAEIIVKYSTVYPFKLPEDNMVCVYCCETYPDPAVFRTHMNEEHETFNPKMAFVHCSEGYIKVDCTNINCRLCFKHFQNLDQIADHLYSEHKKPLDLTVALGLQPFKLENNKLFCAICHYKAVCLRQLSRHTQSHFWRYTCEACGKSYATNTALRSHIRFSHIGTEKICRKCKRTFSSIEERRKHLLESQKCWSHLCCVCGERFMSWHAKQLHLTECHGVEKKVYMCPECGQTFQERKKYRIHFRLTHTDDNYVCSCCGMKFVTKKNLEEHRVSHTMEKLFPCTVCSKSFPRKKNLIQHMWIHMEHKRFECKLCNKKFNQKVSWKTHMKSYHPDLEDLDGKNDNLKLMFSVLSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00274691; iTF_00952963; iTF_01064955;
90% Identity: -
80% Identity: -