Aepi008744.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- MBD2
- Assembly
- GCA_000349105.1
- Location
- KB670792:215046-217008[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-23 5.2e-20 70.3 0.0 1 71 5 70 5 76 0.91 2 2 0.00026 0.76 8.8 0.0 27 73 144 201 126 204 0.87
Sequence Information
- Coding Sequence
- ATGAACGTATCCATCGAACGAAAGCGAACCGATTGTGCTGCACTACCGAAGGGTTGGCAGCGGGAAGAGGTGCTCCGAAAGACGGGCCTTTCCGCTGGAAAGGTGGATGTGTACTACTACAGTCCATTGGGGAAGAAGATTGAAAGTAAGCCACAGCTTGCCCGTGCCCTCGGCGATACGATCGATCTGTCCACGTTCGACTATCAGGCGGGACGCATCATTGCACCACCATCGTCGATGGCCGCCTCTCAGCTGCTGCACTCTCACCACGGTCCAGGCTATCAGCTGCTGCAGCAACAGGCAAACAGTGGCAGTGCCCTGCGCCGGAAGTTGCCACCGTCAGTGCCACTAGGCGGCAGTAGCACACTCAATGCTACACCGATAAGCGCTGGAAGTTGTGTGAAACCTTCATCTCAGTACGATTACAGTCGTGCTATGCGAGCGGATACATCGCTAATTCCGCCGATCAGACAGACAGCGTCGATCTTCAAGCAACCGGTAACGGTCGTACGTTCGCAGGAACCGGACAATGCCAAAGCGAAGCGTGAGCTCCAGCACGGAAGCCAGGTGAAACCGAAGCAGCTCTTTTGGGAGAAACGCTTAGAGAATCTCGGAGCGAGTAATACGCACAACGAAGAGATCGGTTCGATCGAACTACCGAAACGACTGCGACCCATTGGGCCAGGTATACGCGAAACAACGGTGCTACAATCGCTAGCCACTGCCCTGCACCACAACACCCTTCCCGTAACCGGGCAGACGGCGTCGAAAACGTCTCTCAACACAAATGCAGGTGTGTTCATCAATCCCCACCAGCCCCTGATGACGAACGTGACCATCACAGAGGAGGACGTTAAACGGCAGGAAGAGCGCGTTCAGTACGCACGATTAAGGCTACAGGAAGCGTTGCGTGCCTAA
- Protein Sequence
- MNVSIERKRTDCAALPKGWQREEVLRKTGLSAGKVDVYYYSPLGKKIESKPQLARALGDTIDLSTFDYQAGRIIAPPSSMAASQLLHSHHGPGYQLLQQQANSGSALRRKLPPSVPLGGSSTLNATPISAGSCVKPSSQYDYSRAMRADTSLIPPIRQTASIFKQPVTVVRSQEPDNAKAKRELQHGSQVKPKQLFWEKRLENLGASNTHNEEIGSIELPKRLRPIGPGIRETTVLQSLATALHHNTLPVTGQTASKTSLNTNAGVFINPHQPLMTNVTITEEDVKRQEERVQYARLRLQEALRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098998;
- 90% Identity
- iTF_00108390; iTF_00097771; iTF_00101674; iTF_00093453; iTF_00095073; iTF_00106983; iTF_00104370; iTF_00102360; iTF_00100954; iTF_00095646; iTF_00105137; iTF_00103671;
- 80% Identity
- -