Atri001939.1
Basic Information
- Insect
- Andrena trimmerana
- Gene Symbol
- Sub1
- Assembly
- GCA_952773225.1
- Location
- OX731548.1:6707230-6707821[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.22 5.9e+03 -2.6 0.1 30 37 17 24 6 24 0.65 2 3 0.34 8.8e+03 -3.2 0.3 29 37 31 39 28 39 0.72 3 3 5.1e-27 1.3e-22 79.5 0.1 1 51 52 103 52 104 0.97
Sequence Information
- Coding Sequence
- ATGCCGAAAACGAAAGAGTACGTGTCGACCGATGATGACAGCAGCGAGGagGAGGTGAAGCCAAAGAAGAAACCAAAGAGGGAGAACGAAGACAAGGAAGAGAAGGCATCGAAGAAGCCTAAGAAAGAATCTACCGAGGACGAAAATACAATTTGGGATCTTGGGAACAATCGTCAAATTAGTGTACGGGACTTCAAAGGGAAATTGTACGTGGACATTAGAGAAATGTATTACGACAAGGATGCGAATTTGAAGCCTGGAAAGAAAGGAATCTGCCTCAGCATGCCGCAATGGCGAAAATTACTGTCTGCTGTGGAAGATGTAGACAAACTCGTAAAATCCAAATGTTAA
- Protein Sequence
- MPKTKEYVSTDDDSSEEEVKPKKKPKRENEDKEEKASKKPKKESTEDENTIWDLGNNRQISVRDFKGKLYVDIREMYYDKDANLKPGKKGICLSMPQWRKLLSAVEDVDKLVKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071030;
- 90% Identity
- iTF_00087170; iTF_00088008; iTF_00085386; iTF_00086290; iTF_00084564;
- 80% Identity
- -