Amar013657.1
Basic Information
- Insect
- Andrena marginata
- Gene Symbol
- retn
- Assembly
- GCA_963932335.1
- Location
- OZ010662.1:44856937-44866342[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-20 1.7e-16 60.7 0.0 16 89 34 105 28 105 0.93
Sequence Information
- Coding Sequence
- ATGCTCTCGATTATTTTGGTCCGCGAGCCGCGCGTTCGCGGGGCCGACGCGTCGGATTACGGTAACGCGAAAGCTCGTAAAGAGGACGTTTACGTACACGTAGGGACTCCGATCAATCGGCTGCCGATCATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGCCTGGTGGACGTGATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGCGGCGACTGTCGACGCCGGCGGAGCTCCAGGCGGCGATCGACGGGAATCGACGAGAGGGACGGCGAAGCAGCTACGGGGCGTACGCGGCCGGTGGTGGCGCCGCTGGGGACGGTTTGGTGCAGAGGAGCCCTCACACACCGAATTCGCTCGCGTTACACGCGCAAATGTCACCGCTGTCTTTGGTGACGGCGGTGGCGGCCAGTGGACAGCATCACGGCCCGCAGTTGGTGAACGGAAGCGCCGCGCACACACCCCTGCCGCATCATCCGCACCATCCGCAGCACCCGCAGGGAACCCTGGGACAGCCACCGAATGCCGCACCTATTCCCGGAATGGCGCCGTCCGAATTCGAGGCGCGGATGGTCGAATACGTGAAGCTGCTGAACAAAGAGCTGAGGAGCGCGGGAGCGGGCACACCGCCCCCGATGATCCATCGGCAAGGGAGCGCATCGCCGCCGTCGTCCACACCGCCGAGGGACGGTGGATTCAGCGCCCTGGAGATGTCCCGGCTCACCCTGTGGAACATGTACAACAACAACACTCTTTATCCAGGCGTTGGCCACCAGCCACCCCTATCGCCTCAGACCTCCCACTCGCCGCTCCCTCAGGCATCTAGCCCGGAACCTCAGAGGGAGGCTCTCGACCTTGGCCTCAGGTCGTCACCCGTGTCTGCGTCGCCAGCCAGACAGAGTTCACCCTCCTCGGGGGGTAGTCTGCAGATCAAGAGGGACCCTGATTTCACAGGCATTCCAGGACCTCCGCCAGCCAAAAGGCTACTCTCGGACGACGACAGCCCAGCGGAGAAGCACGCCCAGGCCTCCGTGGGCACGCACATTAAAATTTCCAATCGAGGGGACGGAAGAAACGGCGACAACTCCTTGGTGGTCAGCATGGAGCTGAACGGGGTGATGTACCAAGGTGTTCTGTTCGCCCAAACCGACAACAGGGCCGCGAACAGCACGGCGGCCAGCAACAATAACAATAGCACGAAAGCGTCTCGAAGCGTAGTCTCGTGA
- Protein Sequence
- MLSIILVREPRVRGADASDYGNAKARKEDVYVHVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGGGAAGDGLVQRSPHTPNSLALHAQMSPLSLVTAVAASGQHHGPQLVNGSAAHTPLPHHPHHPQHPQGTLGQPPNAAPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDGGFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPQASSPEPQREALDLGLRSSPVSASPARQSSPSSGGSLQIKRDPDFTGIPGPPPAKRLLSDDDSPAEKHAQASVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDNRAANSTAASNNNNSTKASRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00084314; iTF_00085073; iTF_00085953; iTF_00087719; iTF_00088568; iTF_01168959;
- 80% Identity
- -