Afla027769.1
Basic Information
- Insect
- Andrena flavipes
- Gene Symbol
- retn
- Assembly
- GCA_963971345.1
- Location
- OZ020482.1:62838907-62849396[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 5.6e-16 59.5 0.0 17 89 18 88 6 88 0.90
Sequence Information
- Coding Sequence
- ATGGGCGAAGAAAGAACATCGCCATTATCCCAGTCCTGGGCTCCGCAGTCCTGGACTCCGATCAATCGGCTGCCGATCATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTTATCGCCCGCGGCGGCCTGGTGGACGTGATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGCGGCGACTGTCTACGCCGGCGGAGCTTCAGGCAGCGATCGACGGGAATCGACGAGAGGGACGGCGAAGCAGCTACGGGGCTTACGCGGCCGGTGGTGGCGCGGCTGTGGACGGTTTGGTGCAGAGGAGCCCTCACACGCCGAATTCGCTCGCGTTACACGCGCAAATGTCACCGCTGTCTTTGGTGACGGCGGTAGCGGCCGGTGGACAGCATCACGGCCCGCAGTCCTTGGTGAACGGAAGCGCCGCGCACACACCCTTGCCGCACCATCCGCACCATCCGCAACACCCGCAGGGAACCCTGGGACAGCCACCGAATGCCGGACCTATTCCCGGAATGGCGCCGTCCGAATTCGAGGCGCGCATGGTCGAGTACGTGAAGCTGTTGAACAAGGAGCTGAGGAGCGCGGGAGCGGGCACGCCGCCACCGATGATCCACCGGCAAGGTAGCGCATCGCCGCCGTCCTCCACGCCGCCAAGGGACGGGGGATTCAGCGCCCTGGAGATGTCCCGGCTCACCTTGTGGAACATGTACAACAACAACACTCTTTATCCAGGCGTTGGCCACCAGCCACCCTTATCGCCACAGACCTCCCACTCGCCGCTGCCTCAGGCATCTAGCCCGGAACCTCAGAGGGAGGCTCTCGACCTTGGGCTCAGGTCGTCACCCGTGTCTGCGTCGCCAGCGAGGCAGAGTTCACCCTCCTCGGGGGGTAGTCTGCAGATCAAGAGGGACCCTGATCTCACAGGCATTCCAGGACCTCCGCCAGCTAAAAGGCTACTCTCGGACGACGACAGCCCAGCGGAGAAGCACGCCCAGGCCTCCGTGGGCACGCACATTAAAATTTCCAATCGAGGGGACGGAAGGAACGGCGACAACTCCTTGGTAGTCAGCATGGAGCTGAACGGGGTGATGTACCAAGGTGTTCTGTTCGCCCAAACCGACAGCAGGGCCGCGAACAGCACGGCGGCCACCAACAATAACAATAGCACGAAAGCGTCCCGAAGCGTACTTTTATCGTGA
- Protein Sequence
- MGEERTSPLSQSWAPQSWTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGGGAAVDGLVQRSPHTPNSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGTLGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDGGFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPQASSPEPQREALDLGLRSSPVSASPARQSSPSSGGSLQIKRDPDLTGIPGPPPAKRLLSDDDSPAEKHAQASVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSRAANSTAATNNNNSTKASRSVLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00086888;
- 80% Identity
- -