Abic007891.1
Basic Information
- Insect
- Andrena bicolor
- Gene Symbol
- retn_1
- Assembly
- GCA_960531205.1
- Location
- OY482664.1:50353524-50378712[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-26 1.1e-22 80.5 0.0 2 89 46 131 45 131 0.96
Sequence Information
- Coding Sequence
- ATGGGAAACCGCGCGAGTTTAAAGGATTGCCAGGACGCGGTGGAACCGGGAACAGTGTTTTCAAACGTTGGATCCCCCGGGGTTCATAAATCGAACGCCGGCCAATTTCTGTACGAGATCAACGACGACCCGAAGAGGAAGGAGTTCCTAGACGACCTTTTCAGCTACATGCAGAAACGCGGGACTCCGATCAATCGGCTGCCGATCATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGCCTGGTGGACGTGATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACACTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGCGACGGCTGTCGACGCCGGCGGAGCTCCAGGCGGCGATCGACGGGAATCGACGAGAGGGACGGCGAAGCAGCTACGGAGCGTATGCGGCCGGTGGTGGCGCGGCTGGGGACGGTTTGGTGCAGAGGAACCCTCACACGCCGAGTTCGCTGGCGTTGCACGCGCAAATGTCGCCGCTGTCTTTGGTGACGGCGGTGGCGGCCGGTGGACAGCATCACGTCCCGCAGTTGGTGAACGGAAGCGCAGCGCACACACCCTTGCCGCATCATCCGCACCATCCGCAGCACCCGCAGGGAACCCTGGGACAGCCACCGAGTGCCGGACCTATTCCCGGAATGGCGCCGTCCGAATTCGAGGCGCGGATGGTAGAGTACGTGAAGCTGCTGAACAAAGAGCTGAGAAGCGCGGGAGCGGGCACGCCGCCCCCGATGATCCATCGACAAGGAAGCGCATCGCCGCCGTCGTCCACGCCGCCGAGGGACGGGGGATTCAGCGCCCTGGAGATGTCCCGGCTCACCCTGTGGAACATGTACAACAACAACACTCTTTATCCAGGCGTTGGCCACCAGCCACCCCTATCGCCTCAGACCTCCCACTCGCCGCTCCCTCAGGCATCTAGCCCGGAACCTCAGAGGGAGGCTCTCGACCTTGGTCTCAGGTCCTCACCCGTGTCTGCGTCGCCAGCGAGACAGAGTTCACCATCCTCCGGGGGTAGTCTGCAGATCAAGAGGGACCCTGATCTCACAGGCATTCCAGGACCTCCTCCAGCTAAAAGGCTACTCTCGGACGACGATAGCCCAGCGGAGAAGCACGCCCAAGCCTCCGTGGGCACGCACATTAAAATTTCCAATCGAGGGGACGGAAGGAACGGCGACAACTCCTTGGTAGTCAGCATGGAGCTGAACGGGGTGATGTACCAAGGTGTTCTGTTCGCCCAAACCGAGGGCAGGGCCGCGAACAGCACGGCGGCCAGCAACAATAACAATAGCACGAAAGCGTCTCGAAGCGTAGTCTCGTGA
- Protein Sequence
- MGNRASLKDCQDAVEPGTVFSNVGSPGVHKSNAGQFLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGGGAAGDGLVQRNPHTPSSLALHAQMSPLSLVTAVAAGGQHHVPQLVNGSAAHTPLPHHPHHPQHPQGTLGQPPSAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTPPRDGGFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPQASSPEPQREALDLGLRSSPVSASPARQSSPSSGGSLQIKRDPDLTGIPGPPPAKRLLSDDDSPAEKHAQASVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTEGRAANSTAASNNNNSTKASRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00086888;
- 80% Identity
- -