Anig013407.1
Basic Information
- Insect
- Anaulacaspis nigra
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_030264675.1
- Location
- JARJDV010011158.1:9360-12554[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-109 9.7e-105 350.0 31.3 1 300 28 317 28 317 0.94 2 2 0.0064 1.1e+02 1.8 5.6 116 171 328 383 319 392 0.66
Sequence Information
- Coding Sequence
- ATGGACCTCGGTGCCGGACGTCGTCGGACTCCATCTAAATCATCCGCCGAAGACCAAGCGCTCGATCTGATTGCTAAGGAAGCCGAGGCCCGGTTGCTGGCACGACGCGCCGCCAGAGCTGAAGCGCGTGAGATCCGTATGCGCGACTTAGAGCGGCAGCAGCGCGAGCAGGAGGAGAACGCCGACCGACAATTTGATATGCTCAGCGAGCAGCCGACGAGGCGGCCGGCCGCCGCGTCGCGCTACTTGTCGAGCCGACGCTCGTCCGAGGACTCTTTGGAGGACACCGGGAGTCTACGGGATCTCCGCCATGAGCTCAAGGAGATTGAAGAAAAGTTCCGCAAGGCGATGATAGCGAATGCGCAGTTGGACAACGATAAAGCTGCGCAAACGTATCAGTTAGAACTGTTAAAAGATAGATTAGAAGAATTGGAAGAGGATTACTCGCAATTGAAACGCGAACATAAAGATAAATGCAGGGATTTTGACCAGTTGAAGCACTTGACTGCGCAGCTCAAGGAGGAGTTGGGGCTGTACAAGTATGAGCTGGAGGAGCGCGAACGGCTGATTGCCGAAAAGGGCCTAGTGATTGTTGGCACCGAAGAACCGGCGTCGGCAGATGAAACCGAAGGTGTTTCAAATGGCCCGACGAAGATGCGTCGTGCGCTCGTGAGTGCGGAGAATGCGCATTTACTGGAGAATGCGGGCGAGGGCAGCTTGGATGTGCGGCTGGCACGCTTTGCCAAAGAACGTAGCGAACTACTTGATCAAATTAGCCATTTAAAACTAGAATTAGATGAAGAGAAGAACAAGCGTCGAAAAGGCAATAGCGGTTCAATACTCAATGGTCCTGATAGCGATTACGATGCTGCTGATTTACAAAGggaagcaagcaaacaattgGCTGAATACAAATTCAGGGCGCAAAAAGCCGAGCAGGACGTTGCCACCTTGCAAGCGACAAACGCGCGATTAGAAAGTCAAGTAATACGTTACAAAACGGCGGCCGATGTACTGGAAAAAAGCGAGGAATCACTTAAAGCGGAAAAGCGCAAACTGCAACGAGAGgCACGGGAAGCTCAGAGTAGAGCTGAAGAGTTAGAAGTATCAAATACCCACCTTAGTAAACGCTTGGACAAGCTCAAAAACGCCAAGTCAGCTCTCCTCAAAGAAATTTGA
- Protein Sequence
- MDLGAGRRRTPSKSSAEDQALDLIAKEAEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMLSEQPTRRPAAASRYLSSRRSSEDSLEDTGSLRDLRHELKEIEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEDYSQLKREHKDKCRDFDQLKHLTAQLKEELGLYKYELEERERLIAEKGLVIVGTEEPASADETEGVSNGPTKMRRALVSAENAHLLENAGEGSLDVRLARFAKERSELLDQISHLKLELDEEKNKRRKGNSGSILNGPDSDYDAADLQREASKQLAEYKFRAQKAEQDVATLQATNARLESQVIRYKTAADVLEKSEESLKAEKRKLQREAREAQSRAEELEVSNTHLSKRLDKLKNAKSALLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- iTF_00049270;
- 80% Identity
- -