Acur000858.1
Basic Information
- Insect
- Aleochara curtula
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963978815.1
- Location
- OZ022215.1:10822691-10825899[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-108 2.8e-104 348.4 31.0 1 300 28 317 28 317 0.94 2 2 0.0067 1.1e+02 1.8 6.0 116 171 328 383 319 392 0.65
Sequence Information
- Coding Sequence
- ATGGACCTCGGTGCTGGACGTCGTCGGACACCATTAAAATCATCCGCCGAAGATCAAGCGCTCGATATGATTGCTAAGGAAGCCGAGGCCCGGTTGCTGGCACGACGCGCCGCCCGAGCTGAAGCGCGTGAGATCCGTATGCGCGACTTAGAGCGGCAGCAGCGCGAGCAGGAGGAGAACGCCGATCGACAATTTGATATGCTTAGCGAGCAGCCGACGAGGCGGCCGGCCGCCGCGTCGCGCTACTTGTCGAGCCGGCGCTCATCCGAGGACTCTTTGGAGGACACCGGGAGTCTACGGGATCTCCGCCATGAGCTCAAGGAAATAGAAGAAAAGTTCCGCAAGGCGATGATAGCGAATGCGCAGTTGGACAATGATAAAGCTGCGCAAACGTACCAATTAGAACTCTTAAAAGATAGATTAGAAGAATTGGAGGAGGATTACTCGCAATTGAAACGCGAACATAAAGATAAATGCAGGGATTTTGATCAGTTGAAACACTTGACGGCGCAGCTCAAAGAGGAGCTGGGACTCTACAAGTATGAGTTGGAGGAGCGCGAACGGCTGATTGCCGAAAAGGGCTTAGTGATCGTTGGCACCGAGGAACCGGCGTCGACAGATGAGACTGAAGGTGTCTCGAACGGCCCGACGAAATTGCGTCGCGCACTTGTAAGCGCAGAGAATGCACATCTACTGGAAAATGCGGGCGAAGGCAGCTTGGATGTGCGGCTGGCACGCTTTGCCAAAGAACGTAGCGAACTACTTGATCAAATTAGCCATTTAAAACTAGAATTAgatgaagagaaaaataagCGTCGGAAAGGCAACAGCGGTTCGATACTCAATGGTCCAGATAGCGATTATGATGCTGCTGATTTACAAAGGgaagcaagcaaacaattgGCTGAATACAAATTCAGGGCGCAAAAAGCCGAGCAGGATGTTGCCACCTTACAAGCGACAAACGCGCGGTTAGAAAGTCAAGTGATCCGTTATAAGACGGCGGCCGATGTATTGGAAAAAAGCGAGGAATCACTTAAGGCGGAAAAACGCAAACTGCAACGAGaggcACGGGAAGCTCAGAATAGAGCTGAAGAATTAGAAGTATCTAATACACATCTTAGTAAACGCTTGGACAAGCTCAAAAACGCCAAGTCGGCACTCCTCAAAGAAATTTGA
- Protein Sequence
- MDLGAGRRRTPLKSSAEDQALDMIAKEAEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMLSEQPTRRPAAASRYLSSRRSSEDSLEDTGSLRDLRHELKEIEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEDYSQLKREHKDKCRDFDQLKHLTAQLKEELGLYKYELEERERLIAEKGLVIVGTEEPASTDETEGVSNGPTKLRRALVSAENAHLLENAGEGSLDVRLARFAKERSELLDQISHLKLELDEEKNKRRKGNSGSILNGPDSDYDAADLQREASKQLAEYKFRAQKAEQDVATLQATNARLESQVIRYKTAADVLEKSEESLKAEKRKLQREAREAQNRAEELEVSNTHLSKRLDKLKNAKSALLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- iTF_00083902;
- 80% Identity
- -