Afra036879.1
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- kn
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010050090.1:24040-29376[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-138 6.5e-134 448.7 0.0 183 385 8 239 5 242 0.99 2 2 1.2e-09 1.4e-05 25.0 11.0 422 502 242 326 238 337 0.68
Sequence Information
- Coding Sequence
- atgcgCGAGTGGAAAGGATTATTTTTCCTGAAATTCTTTCTAAAATGCAATCAAAATTGTTTGAAGAACGCCGGCAATCCAAGAGATATGAGACGCTTTcagGTTGTCATCTCCACTCAAGTGACCGTTGACGGCCCGCTTTTAGCCATATCCGATAATATGTTCGTACATAACAATTCGAAACATGGACGTCGCGCTAAACGCTTGGATACCACGGAAGGTACAGGAAACTCCTCCCTGTCCTTAACGGGTCACCCACTCGCGCCTGACAGTACCTATGATGGTCTCTATCCACCATTGCCTGTGGCCACGCCCTGCATCAAAGCGATTTCGCCCAGCGAGGGTTGGACTTCTGGCGGCGCCACAGTCATTATTGTTGGTGATAATTTCTTTGATGGCCTCCAAGTTGTCTTCGGCACAATGCTCGTTTGGAGCGAACTGATTACATCGCATGCCATTCGGGTGCAGACACCACCACGCCACATACCCGGTGTGGTGGAGGTGACTTTGTCATACAAAAGCAAACAGTTTTGCAAAGGTTCACCGGGGCGTTTTGTTTATGTTTCAGCCCTCAACGAGCCAACCATCGATTATGGTTTTCAACGCCTACAAAAACTCATACCACGTCATCCTGGTGATCCGGAGAAGTTGCAAAAGGAAATCATACTCAAGAGAGCAGCCGACTTAGTTGAAGCCTTGTATTCGATGCCAAGATCTCCTGGCGGCTCAACCGGCTTCAACTCCTACACCGGCCAGCTGGCTGTGAGCGTTCAAGATACCGCCGGCCAATGGACCGAGGACGATTATCAGCGTGCACAGTCGAGCAGCGTTAGTCCACGTGGCGGTTATTGCAGTAGCGCTTCTACGCCACACAGTTCGGGAGGCTCTTATGGCGCTTCGGTGGCCGCTAATGGTTATGGACCCACCACCAATATGGGTACGTTATCCTCTTCACCAGGCAGTGTTTTCAACTCCACCAGCAGTAAGTTTAAGAAGATGATAGATACCTATGTAGACGAATGCATGTGCCCCTTCGATTAG
- Protein Sequence
- MREWKGLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYTGQLAVSVQDTAGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASVAANGYGPTTNMGTLSSSPGSVFNSTSSKFKKMIDTYVDECMCPFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045258;
- 90% Identity
- iTF_01045258; iTF_00090952; iTF_00191812; iTF_00191869; iTF_01357714; iTF_01505172; iTF_00992343; iTF_01562553; iTF_00189729; iTF_01563478; iTF_00082716;
- 80% Identity
- iTF_00090952;