Smar047183.2
Basic Information
- Insect
- Sphenella marginata
- Gene Symbol
- kn
- Assembly
- GCA_951509765.1
- Location
- OX608083.1:50447152-50454696[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-118 5.8e-114 383.1 0.0 205 385 1 210 1 213 0.99 2 2 2.2e-10 2e-06 28.0 14.3 422 514 213 312 209 327 0.66
Sequence Information
- Coding Sequence
- ATGAGACgatttcagGTTGTCATCTCTACACAAGTGGCTGTCGAAGGTCCACTTCTAGCCATATCCGATAATATGTTCGTGCATAATAATTCGAAACATGGACGACGCGCCAAACGTTTGGATACTACGGAAGGTACAGGAAACTCCTCCCTGTCCTTAACGGGTCACCCACTTGCGCCTGACAGTACCTATGATGGTCTGTATCCACCATTGCCCGTAGCCACGCCTTGCATCAAAGCCATTTCACCCAGCGAAGGTTGGACCTCAGGTGGCGCTACAGTCATTATTGTTGGTGATAATTTCTTTGATGGCCTACAAGTTGTATTTGGTACAATGCTCGTTTGGAGTGAGTTAATTACAACGCACGCCATTCGAGTGCAAACTCCACCACGTCACATACCCGGTGTGGTGGAGGTGACTTTATCGTATAAGAGCAAGCAATTTTGCAAGGGTTCGCCGGGACGTTTCGTTTATGTTTCAGCCCTTAATGAGCCAACTATAGATTATGGGTTTCAACGTCTACAAAAACTCATACCACGTCATCCTGGCGATCCGGAAAAGTTGCAAAAGGAAATTATACTGAAGCGAGCAGCCGATTTAGTAGAGGCTCTATATTCAATGCCAAGATCACCTGGCGGTTCCACCGGTTTCAACTCTTACACTGGTCAACTTGCTGTGAGTGTTCAAGACACCGCTGGTCAATGGACTGAAGATGATTATCAACGTGCTCAATCGAGCAGTGTAAGCCCACGTGGCGGCTATTGTAGCAGTACATCGACGCCCCATAGTTCCGGTGGCTCTTACGGCGCTTCAGTGGCTGCTAATGGTTATGGTCCCACCACTAATATGGGTACGTTATCCTCTTCACCAGGCAGTGTTTTCAACTCGACGAGCAGCAGTGCCTTTTCGCCATTAATTTCAACAGTGTCGTCACCGTGGCATCAGGCGCTAGTGCAACATCACCACACCCATCCACATGCCTATCATCATCACCAGCCGTGGCATAATCCAGGTGCCTCAATAGCAACGGCCGCCGTGTAG
- Protein Sequence
- MRRFQVVISTQVAVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELITTHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYTGQLAVSVQDTAGQWTEDDYQRAQSSSVSPRGGYCSSTSTPHSSGGSYGASVAANGYGPTTNMGTLSSSPGSVFNSTSSSAFSPLISTVSSPWHQALVQHHHTHPHAYHHHQPWHNPGASIATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045258;
- 90% Identity
- iTF_00080981;
- 80% Identity
- -