Basic Information

Gene Symbol
kn
Assembly
None
Location
JAPVRH010005544.1:6631-9830[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-118 4.5e-115 385.4 0.0 205 385 1 210 1 212 0.99
2 2 4.1e-10 1.8e-06 26.9 12.5 422 508 213 304 210 314 0.71

Sequence Information

Coding Sequence
ATGAGACGCTTTCAGGTTGTCATCTCGACACAGGTGACTGTTGATGGCCCACTCCTGGCTATATCCGACAATATGTTCGTACACAACAATTCGAAGCATGGCCGCCGCGCCAAACGTTTGGACACCACGGAAGGTACAGGAAACTCCTCCCTGTCCTTAACGGGTCACCCACTTGCGCCTGACAGTACCTATGATGGTCTCTATCCGCCATTGCCCGTGGCCACGCCCTGCATCAAAGCTATTTCGCCCAGCGAGGGTTGGACCTCTGGCGGCGCTACCGTTATTATTGTGGGTGATAATTTCTTTGATGGCCTCCAAGTGGTTTTCGGTACAATGCTCGTTTGGAGCGAATTGATTACATCACATGCCATTCGTGTGCAAACACCACCACGTCACATACCCGGTGTGGTGGAGGTGACTTTGTCATATAAGAGCAAACAGTTTTGCAAGGGTTCGCCGGGACGTTTTGTCTATGTTTCAGCGCTTAATGAACCTACCATCGATTACGGTTTTCAACGCCTACAAAAGCTTATACCACGTCACCCAGGCGATCCAGAGAAATTGCAAAAGGAAATCATACTCAAACGCGCAGCCGATTTGGTGGAGGCCTTGTACTCCATGCCAAGATCTCCCGGCGGCTCGACCGGCTTTAATTCATACACAGGGCAGCTTGCTGTAAGCGTTCAGGATACCGCCGGCCAATGGACTGAAGACGACTATCAGCGCGCCCAATCGAGCAGCGTGAGTCCACGTGGCGGCTATTGCAGCAGTGCTTCTACGCCACACAGTTCGGGCGGCTCTTACGGCGCTTCGGTGGCCGCTAACGGCTATGGCCCCACAAGCAATATGGGTACGTTATCCTCTTCACCAGCCAGTGTTTTCAACTCCGCCAGCATGTCGTCACCGTGGCATCAGGCGCTAGTGCAACACCACCACACACATCCGCACCACTATCACCACCATGCCCACCAGCCGTGGCACAATCCAGCTGCCTCAATCGCAACGGCCGCCGTATAA
Protein Sequence
MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYTGQLAVSVQDTAGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASVAANGYGPTSNMGTLSSSPASVFNSASMSSPWHQALVQHHHTHPHHYHHHAHQPWHNPAASIATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045258;
90% Identity
iTF_00080981;
80% Identity
iTF_00191812;