Ucar006408.2
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- kn
- Assembly
- GCA_960531455.1
- Location
- OY482670.1:102774977-102786066[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-117 6.9e-113 379.3 0.0 205 385 1 210 1 214 0.99 2 2 5.1e-10 8e-06 25.8 11.5 423 516 214 310 210 320 0.74
Sequence Information
- Coding Sequence
- ATGCGACGCTTTCAGGTTGTAATTGCCACACAAGTGGCTGTGGAGGGACCGCTCTTAGCCATATCCGATAATATGTTCGTACATAACAATTCGAAACACGGACGCCGCGCCAAACGCTTGGATACCACGGAAGGTACAGGCAACTCCTCCCTGTCCTTATCGAGTCACCCACTTGCGCCTGACAGTACCTATGATGGACTCTATCCACCATTGCCTGTGGCTACGCCTTGCATCAAAGCGATATCACCTAGCGAAGGTTGGACCTCTGGCGGCGCTACCGTCATTATTGTCGGTGATAATTTCTTTGACGGCCTCCAAGTGGTCTTTGGCACAATGCTTGTGTGGAGTGAGCTGCTCACATCCCATGCCATTCGCGTGCAGACACCGCCACGACACATACCCGGTGTGGTGGAGGTGACTCTGTCCTATAAGAGTAAACAGTTTTGTAAGGGCTCGCCGGGACGTTTCGTATATGTTTCAGCCCTCAATGAACCAACCATAGATTATGGGTTTCAACGTCTACAAAAACTCATACCACGGCATCCTGGTGATCCGGAGAAGTTGCAAAAAGAAATCATACTGAAACGAGCGGCCGATTTGGTGGAGGCTTTATATTCGATGCCAAGATCGCCTGGCGCCTCAACAGGCTTCAACTCGTACACTGGCCAACTTGCCGTGAGCGTACAAGACACCGCCGGTCAATGGGCCGACGATGACTATCAGCGCGCACAATCGAGCAGTGTTAGTCCACGGGGCGGTTACTGCAGCAACACTTCGACACCACACAGCTCTGGTGGTTCTTATGGCGCTAATGGTTATGGTGCTACCACCAATATGGGTACGTTAACTTCTTCAACAGGCAGTATTTTCAACACCACCGGCAGCAGTGCCTTTTCGCCATTAATTTCAACAGTGTCGTCACCGTGGCATCAGGCGCTAGTGCAACATCATCATACGCATCCACATCCCTATCACCACCATGGGCACCAGCCGTGGCATAATCCAGCTGCCTCAATAGCAACGGCCGCCGTGTAA
- Protein Sequence
- MRRFQVVIATQVAVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLSSHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELLTSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGASTGFNSYTGQLAVSVQDTAGQWADDDYQRAQSSSVSPRGGYCSNTSTPHSSGGSYGANGYGATTNMGTLTSSTGSIFNTTGSSAFSPLISTVSSPWHQALVQHHHTHPHPYHHHGHQPWHNPAASIATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01231379; iTF_00679265; iTF_01563478; iTF_01562553; iTF_00082716;
- 90% Identity
- iTF_00080981;
- 80% Identity
- -