g6598.t1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphipyra tragopoginis
Gene Symbol
nfxl1
Assembly
GCA_905220435.1
Location
HG992011.1:1930871-1933342[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1 8.5e+03 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.0072 62 2.7 0.7 4 10 169 175 168 175 0.97
3 17 1.6e-07 0.0013 17.6 15.9 3 19 186 202 185 202 0.95
4 17 6.3e-08 0.00054 18.9 12.8 3 19 239 255 237 255 0.92
5 17 1.7e-10 1.4e-06 27.1 12.7 1 19 290 308 290 308 0.99
6 17 4.6e-06 0.039 12.9 18.2 3 19 345 361 337 361 0.88
7 17 1 8.5e+03 -5.3 2.2 5 10 384 389 384 389 0.88
8 17 3.3e-05 0.28 10.2 20.3 1 18 395 412 395 413 0.97
9 17 2.2e-10 1.9e-06 26.7 14.0 1 19 422 440 422 440 0.99
10 17 8.5e-05 0.73 8.9 6.2 9 19 488 498 486 498 0.90
11 17 0.0022 19 4.4 6.9 1 12 508 518 508 518 0.90
12 17 0.16 1.4e+03 -1.6 3.1 14 18 547 551 547 552 0.90
13 17 0.091 7.8e+02 -0.8 0.4 8 12 568 572 567 579 0.80
14 17 4.5e-06 0.039 13.0 5.3 1 11 588 598 588 599 0.97
15 17 3e-05 0.26 10.3 12.4 3 18 629 645 628 646 0.88
16 17 0.33 2.9e+03 -2.6 1.2 11 16 677 682 677 683 0.83
17 17 5.5e-05 0.47 9.5 12.9 1 18 687 705 687 706 0.86

Sequence Information

Coding Sequence
ATGGCGCGCAGATATAGGGACGCTGCTGCAAAATTGCAGCTAAATGTCCAGAAACATTTGAAAGGAATGAAGGAACTGTCGTCATCAGAAGATGAGGATCCCTGCGAATCTAGCGTCCTGGATGGAGTGTTCCAGAGTTACTGGCGTGGCGGCGGAGACACTCACTTGCTGAACAGGACAAAAAATCTCCTAGAGGAAGCTATTAGCGGCCGCTCTGTAACATGTCTTATATGCATAGGATCGATCAAAAAAAGTCACGCTATTTGGACTTGCGATCATTGCTACTCCTATTTCCACCTATCTTGTATACAAAAATGGTCGAACGACAGCATAAGCTTACGTAGTGAAGAGAGTCAGGGCCCAATAACTGTAATGAAGCAACAGAAAATTGAATGGTGTTGTCCTAAGTGCCGACACTCGTATTCTAAGGAAGAAATTCCCCGTAAATATCGCTGTTTTTGTGGCAAAACTGATGACCCACCGCACCATCCCTGGCTTATCCCTCACACTTGTGGAGAAGTTTGTGAAAAAAGACTTTCTACTGGTGAGAATTGTAAACATAAATGCTTGCTCTTATGCCACCCTGGACCATGTCCACCGTGCCCACAAACCGTAAATGGAATATGTTTTTGTGGGAAGGAACGTAAGAGAGTACGGTGCAGCGCTGCCAAATGGTCTTGTGGACAAATTTGTAAGAACACTCTCCTATGTAAGACGCACAATTGTGAAAACGTCTGTCATGAAGGTGACTGTCCCCAATGCAGCTACACTAGTATTCAACCATGTAAATGCGGTACCGAAAAAGCTAAAAGACCATGCAATGATCCCTTTTGGCAGTGCCAGAAGCAATGCAACAAATTATTTTCATGTGGCTATCATAAATGTGAAAAAATATGCCATTCAGGCGACTGTGGGTCCTGCCCCAACTCCGGAATGACATCTTGTCCATGCGGAGCAAACCAGCGCTTCGTACAATGTCCAGATGTTATGGAAACCTGCTTAGGTACGTGTGGGAAAAGACATGAAGATTGTGATCACAACTGCCCTGAAAAATGCCACAACGGAAACTGCCCACCTTGCCAAGAGCTAATACCAAAGAAATGTCACTGCTCAACACATACAAGGTCCCTACCATGTAGCAAGGAGTTCAAATGTGAGACCAAGTGCAGAGGGATACGACCATGCGGTAAACATGGGTGTGGACGAAAATGCTGCAATGGGAATTGCCCTCCATGTGAGAAAATATGTGACAAACCCCTCCAATGCGGTAGGCATAAATGCACCAATATTTGCCATCGTGGACCATGCTATCCATGCCCTCTAGAATCAAAAGTCACCTGCAGATGCAAAGAAACTTACGTAACGGTCCCATGTGGGAGGGAACGGCAGACAAAACCACCAAAATGCAGCTTGCcatgcaaaataaaatacaaatgtggACATAGCGAGGACAATAATCACTCCTGCCATTTCGGTGACTGTCCGCCCTGCAAAGCTATTTGTTACAAACAATATCCAAAGTGTAGTCACCAATGTAAAGCGGTGTGTCACGAATATGTTGCAGTGCTCTTCAAACAGGTTGAAAAGCCCGCTACTCCATGGGAAGTGCAACCACCAAAGACCAAGATAATGACTTTAGATTGTCCGCCGTGCGGCACACCAATACCGATTATCTGCTTTGGAGAACATGAGACAGACAACCAACCTTGCCACTCTGCTTCCCGGAGGCCATGTGGACGAGAGTGTGGGCGACCATTGTCCTGTGGAAATCACAAATGCACTTTACTCTGTCATCTCTACAGCCCTGTTCCTGAGTACCCAAACGTACCTTCCAGTTGTAAGCAATGTAACAAAGAATGTTTAGTTCCTCGTCCTCAAAAATGTATGCATAAATGTTCTATTAGAGCCTGTCATCCAGGTCCATGCCGTCCCTGCGAAATACTTGAACGAGTAGCCTGCCACTGTGGCTTAACAGAAATTTACTTGCGTTGCCGGGAACTATCTACAGCAACCGAAGAAATGTTGTCATGCAAGGGACAGTGTCCTAAAAACTTGGATTGTGGCCACCGCTGCCGTAATACTTGCCATTCAGGTGGCTGTAGCAAGCAAGTATGTACTAAGAAAACCAAAGTGCACTGCGCATGCGGTAACTTAAAGAAGGACGCTCCTTGCACCTCGGTTAGAAATGGAGACACGAAAATACTTTGTGACGAAACATGTGAAGCTAAGAAGATTGCTGCTAAATTAGagaatgaaaaagaaaaacagaGATTGAAGGAGTTGGAAGAAGAGAAGAATCGCAAGGAGTTGGCAGAGTATGAGTGGAAATTGAGCGGTAAAAAGAAGAAATATAAGGAAAAGAAAATGGTGGTTGGTAAGGATGACAgaggttttttgaaaaaatattggatACCAATAACATCATTTCTAGTTATGATGCTAGCTgctttttattatatattttatgtataa
Protein Sequence
MARRYRDAAAKLQLNVQKHLKGMKELSSSEDEDPCESSVLDGVFQSYWRGGGDTHLLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESQGPITVMKQQKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPPHHPWLIPHTCGEVCEKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGICFCGKERKRVRCSAAKWSCGQICKNTLLCKTHNCENVCHEGDCPQCSYTSIQPCKCGTEKAKRPCNDPFWQCQKQCNKLFSCGYHKCEKICHSGDCGSCPNSGMTSCPCGANQRFVQCPDVMETCLGTCGKRHEDCDHNCPEKCHNGNCPPCQELIPKKCHCSTHTRSLPCSKEFKCETKCRGIRPCGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVTVPCGRERQTKPPKCSLPCKIKYKCGHSEDNNHSCHFGDCPPCKAICYKQYPKCSHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCGTPIPIICFGEHETDNQPCHSASRRPCGRECGRPLSCGNHKCTLLCHLYSPVPEYPNVPSSCKQCNKECLVPRPQKCMHKCSIRACHPGPCRPCEILERVACHCGLTEIYLRCRELSTATEEMLSCKGQCPKNLDCGHRCRNTCHSGGCSKQVCTKKTKVHCACGNLKKDAPCTSVRNGDTKILCDETCEAKKIAAKLENEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKKYWIPITSFLVMMLAAFYYIFYV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01425655; iTF_01539291; iTF_00172414;
80% Identity
-