Xare003770.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xylocampa areola
Gene Symbol
nfxl1
Assembly
GCA_935412865.1
Location
CAKXYQ010000111.1:145958-148429[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 4 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.029 1.8e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 19 6.2e-07 0.0038 17.7 15.9 3 19 186 202 185 202 0.95
4 19 4 2.5e+04 -5.5 1.2 6 10 227 231 227 231 0.69
5 19 1.3e-07 0.00079 19.8 13.1 3 19 239 255 237 255 0.92
6 19 1.5 9.4e+03 -2.8 2.2 6 10 280 284 279 284 0.83
7 19 2.8e-09 1.7e-05 25.1 13.1 1 19 290 308 290 308 0.99
8 19 1.2e-05 0.077 13.5 19.6 3 19 345 361 337 361 0.86
9 19 4 2.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 19 1.2e-05 0.073 13.6 18.3 1 18 395 412 395 413 0.97
11 19 8.9e-10 5.5e-06 26.7 14.0 1 19 422 440 422 440 0.99
12 19 0.0004 2.5 8.7 6.2 10 19 489 498 486 498 0.91
13 19 0.0086 53 4.4 6.9 1 12 508 518 508 518 0.90
14 19 0.69 4.3e+03 -1.7 3.6 14 18 547 551 547 552 0.87
15 19 0.4 2.5e+03 -0.9 0.1 8 12 568 572 567 573 0.82
16 19 1.8e-05 0.11 13.0 5.3 1 11 588 598 588 599 0.97
17 19 4 2.5e+04 -7.4 4.2 6 10 616 620 613 620 0.66
18 19 0.00027 1.7 9.2 13.5 3 18 629 645 628 646 0.86
19 19 0.00068 4.2 7.9 15.6 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCACGCAGATATAGAGATGCTGCTGCAAAAATGCAGCAAAATGTTCAGAAACATTTGAAAGAAATGAAGGAACTGTCATCTTCAGAGGATGAGGATCCTTGCGAGTCTAGTGTTCTGGAAGGTGTGTTCCAGAGTTATTGGCGCGGCGGGGGAGACACTCATATGCTGAATAGGACGAAAAACCTCCTTGAAGAAGCCATCAGCGGCCGCGCTGTGACGTGTCTAATATGTATAGGTTCAATCAAAAGAACTCACGCTTTATGGACTTGCGATCATTGTTATTCCTATTTTCATCTATCTTGTATACAAAAATGGTCGAACGACAGTATCAGCTTGCGCAGCGAAGAGAGCCACGGCCCCATAGCAGTTATAAAACAACAGAAAATTGAATGGTGTTGTCCTAAGTGCCGGCACTCGTATTCTAAGGAAGAAATACCGCGTAAGTATCGCTGTTTCTGTGGAAAAACTGATGACCCACCATACCACCCATGGCTTATCCCTCACACTTGTGGAGAAGTCTGTGAAAAGAGGTTGTCAACTGGTGACAGCTGTAAACATAAATGTTTACTATTATGCCACCCTGGTCCCTGTCCACCGTGCCCTCAAACTGTTAACGGGATATGTTACTGTGAAAAAGAACGCAAGAGGGTCAGATGCAGTGCTGCTAAATGGTCTTGTGGGCAACTTTGTAAGAAAAATCTTTTATGCAAGACACATAAATGTGAAAATGTATGTCATGAAGGTGATTGTCCTCAGTGCAGCTATACTAGTACCCAGCCATGCCAATGTGGAACTGAGAAGGCTAAGAGACCATGTAATAATCCATTTTGGCAGTGTCAGAAGCCATGTAACAAACTATTTTCATGTGGCTATCACAAATGTAATAAAATATGTCATTCAGGCAACTGTGGGTCATGCCCTAACTCTGGAATGACATCATGTCCCTGTGGAGCCAACCAGCGCTTTGTACAATGTCCAGATGTAATGGAAACCTGCTTAGGTACATGTGGTAAACGGCATGAAGATTGTGAACATAACTGCCCAGAAAAATGCCACAATGGACCATGTCCACCTTGCCAAGTTTTGATACCAAAGAAATGTCACTGCTCTACACATACTAGGTCCTTACCCTGCAGCAAGGAATTCAAATGTGAGACCAAATGTAGAGGGATACGGCCATGTGGCAAACATGGGTGTGCACGAAAATGCTGTAATGGAAACTGCCCCCCATGCGAGAAAATATGTGACAAACCTCTTCAATGCGGAAGGCATAAATGTACAAATATTTGTCACCGTGGACCTTGCTATCCATGCCCATTGGAATCAAAAGTAACCTGCAGATGTAAAGAAACCTATGTCAAAGTCCCATGTGGAAGGGAACGCCAGACAAAACCACCAAAATGCAGCTTACCTTGCAAAATAAAATATAAATGTGGCCACAGTGAGGAAAACAGGCACTCCTGTCATTTCGGAGACTGTCCACCATGCAAAGCTATTTGTTACAAACAATATCCAAACTGTAGTCACCAATGTAAAGCAGTCTGCCATGAATATGTTGCAGTCCTTTTTAAGCAAGTTGAGAAGCCTGCCACTCCTTGGGAAGTGCAACCACCAAAGACCAAAATAATGACATTAGATTGTCCCCCATGTGATATGCCTATACCAATTGTTTGCTTTGGAGAACATGAGACAGACAACCAACCTTGCCACTCGGCTACTCGCAGGCCGTGTGGAAGAGAGTGTGGAAAATCACTAGCTTGTGGTAATCACAAGTGCACTTTACTCTGCCATCTCTACTCTCCTCTCCCTGAGTATCCTAATGTGCCTTCCAGTTGTAAACAATGCGAACGAGAATGCTCAGTTCCTCGTCCAGAAAAATGTACTCATAAGTGTTCTATTCGAGCCTGTCATCCAGGTCCATGCCGTCCATGTGAGATACTAGAAAGAATAGCTTGTCACTGTGGTTTAACAGAGATTTACTTGCGCTGTCGAGAACTATCTAGAGCAACTGAGGAGATGCTTTCTTGCAAGCAGCAATGTCCTAAAAACTTAGATTGTGGTCACCGCTGCCGTCACACATGTCACTCTGGAACTTGTGGCAACCAAGTATGCACCAAGAAAACCAAAGTACATTGTCCGTGTGGAAATATAAAAAAAGATGCTCCTTGCAACTCGGTTAGAAATGGAGACACAAAAATATTATGTGACCAAACTTGCGAGGCTAAAAAGATTGCTTCCAAGTTGGAGCATGAGAAAGAAAAACAGAGATTAAAAGAATTGGAAGAAGAGAAAAATCGCAAGGAATTGGCAGAGTATGAGTGGAAATTGAGTGGTAAAAAGAAGAAATATAAGGAGAAGAAGTTAGTGGTAGGTAAGGATGACAGAGGATTCTTGAAGAAATATTGGATACCAATATCATCATTTCTAGTTATGATGCTAGCAGCTTTTTACTATATATTTTATGTATGA
Protein Sequence
MARRYRDAAAKMQQNVQKHLKEMKELSSSEDEDPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEAISGRAVTCLICIGSIKRTHALWTCDHCYSYFHLSCIQKWSNDSISLRSEESHGPIAVIKQQKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCEKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQLCKKNLLCKTHKCENVCHEGDCPQCSYTSTQPCQCGTEKAKRPCNNPFWQCQKPCNKLFSCGYHKCNKICHSGNCGSCPNSGMTSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHNCPEKCHNGPCPPCQVLIPKKCHCSTHTRSLPCSKEFKCETKCRGIRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVKVPCGRERQTKPPKCSLPCKIKYKCGHSEENRHSCHFGDCPPCKAICYKQYPNCSHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDMPIPIVCFGEHETDNQPCHSATRRPCGRECGKSLACGNHKCTLLCHLYSPLPEYPNVPSSCKQCERECSVPRPEKCTHKCSIRACHPGPCRPCEILERIACHCGLTEIYLRCRELSRATEEMLSCKQQCPKNLDCGHRCRHTCHSGTCGNQVCTKKTKVHCPCGNIKKDAPCNSVRNGDTKILCDQTCEAKKIASKLEHEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKLVVGKDDRGFLKKYWIPISSFLVMMLAAFYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00072400;
80% Identity
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