Tmat005638.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thalpophila matura
Gene Symbol
nfxl1
Assembly
GCA_948465475.1
Location
OX419198.1:1863924-1866395[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 2.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.014 1.6e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 17 3.1e-07 0.0036 17.6 15.5 3 19 186 202 185 202 0.95
4 17 2 2.3e+04 -5.5 1.2 6 10 227 231 227 231 0.69
5 17 5.5e-08 0.00063 20.1 12.0 3 19 239 255 237 255 0.92
6 17 1.7 1.9e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 17 4.2e-10 4.8e-06 26.8 12.9 1 19 290 308 290 308 0.99
8 17 7.5e-06 0.086 13.2 18.4 3 19 345 361 337 361 0.86
9 17 6.7e-05 0.76 10.2 20.3 1 18 395 412 395 413 0.97
10 17 4.5e-10 5.1e-06 26.7 14.0 1 19 422 440 422 440 0.99
11 17 0.00019 2.2 8.7 6.3 9 19 488 498 486 498 0.90
12 17 0.015 1.8e+02 2.6 7.6 3 12 509 518 508 518 0.87
13 17 0.4 4.6e+03 -1.9 3.4 14 18 547 551 547 552 0.85
14 17 0.2 2.3e+03 -0.9 0.1 8 12 568 572 567 573 0.82
15 17 9.1e-06 0.1 13.0 5.3 1 11 588 598 588 599 0.97
16 17 0.00025 2.8 8.4 14.0 4 18 630 645 628 646 0.85
17 17 4.1e-06 0.047 14.1 12.0 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGAAGGTACAGAGATGCTGCTGCAAAATTGCAGCTAAATGTCCAGAAACATCTAAAAGAAATGAAGGACCTGTCGTCGTCGGAAGATGAGGATCCTTGCGAGTCCAGCGTCCTGGAAGGGGTGTTCCAGAGTTACTGGCGCGGCGGCGGAGACACTCACATGCTGAACAGGACTAAAAACCTCCTTGAAGAAGTTATTAGCGGCCGCGCTGTAACGTGTCTTATCTGCATAGGATCGATCAAAAAAATTCACGCTATATGGACTTGCGATCACTGCTATTCCTATTTCCATTTATCTTGTATACAAAAGTGGTCAAACGACAGTATTAGCTTACGCAGTGAAGAGAGTCATGGTCCTATATCAGTAATAAAACAACAGAAAATTGAATGGTGCTGTCCAAAGTGCCGACAATCTTATTCAAAAGAAGAAATACCGCGAAAATATCGCTGTTTCTGCGGCAAAACTGATGACCCACCGCATCATCCCTGGCTTATTCCGCACACTTGTGGAGAAGTTTGTGAAAAAAGACTGTCTACTGGTGAAAATTGTAAACATAGATGCTTGCTCTTATGTCACCCTGGTCCCTGCCCTCCGTGCCCACAAACTGTTAATGGAATATGTTTCTGTGAGAAGGAACGTAAGAGAGTGCGGTGCAGTGCTGCCAAATGGTCCTGTGGCCAACTCTGTAAGAAAAATCTTTTATGTAAGACTCATAAATGCGAAAATGTCTGCCACGCAGGTGATTGTCCCGAATGTAGCTACACTAGCATTCAGACATGCCAATGCGGTACTGAGAAAGCTAAAAGACCATGCAGTGATCCATTGTGGCAGTGCAAGAAGCCTTGTAACAAGTTATTTTCATGTGGCTATCATAAATGCGAGAGAATCTGCCATTCAGGAAACTGTGGGTCCTGTCCCAACTCAGGGATGTTATCATGTCCCTGCGGTGCAAACCAGCGCTTTGTCCAATGTCCTGATGTTATGGAGACCTGCTTAGGTACTTGTGGTAAAAAGCATGCAGATTGTGAACATAACTGCCCAGAAAAATGCCACAATGGGAACTGCCCACCTTGCCAAGTTATGGTAGCGAAGGAATGCCACTGCTCAACACATACAAGGTCCCTACCATGTAGCAAGGATTTCAAATGTGACACTAAATGTAGAGGGATACGACCGTGCGGTAAACATGGTTGTGGACGAAAATGCTGTAACGGAAACTGCCCTCCATGTGAAAAAACATGTGACAAAGGTCTCCAGTGTGGTAGACATAAATGCACAAACATATGCCATCGTGGACCATGCTATCCATGCCCTTTGGAATCTAAGGTAACATGCAGATGCAAAGAAACCTATGTAAGGGTCCCGTGTGGACGGGAACGGCAAACAAAACCACCAAAATGCAGCTTACCATGCAAAATTAAATACAAGTGTGGTCATAGTGAGGAAAATACGCACTCCTGTCATTTCGGTGACTGTCCACCTTGCAAAGCAATCTGTTACAAACAATATCCAAAATGTACTCATCAGTGTAAAGCGGTGTGCCATGAATATGTTGCGGTGGTCTTCAAACAGATTGAGAAACCCGCTACTCCGTGGGAAGTGCAACCACCAAAGACTAAGATTATGACCTTAGAGTGTCCACCATGTGACACTCCGATACCAATAGTTTGTTTTGGAGAACATGAGATGGACAACCAGCCTTGCCACTCAGCTACTCGGAGACCTTGTGGAAGAGAATGTGGACGGCCACTAGCCTGTGGAAACCACAAGTGTACTTTGCTCTGTCATCTGTACACTCCTAACCCCGAGTACCCAAACGTGCCTTCCAGTTGTAAGCAGTGTAACAGAGAATGTTCAGTTCCTCGTCCTAATAAATGTGCCCATAAATGCCCTATCCGAGCCTGCCATCCAGGTCCGTGCCGACCATGTGAGATACTTGAACGTGTGGCCTGCAACTGTGGCATAACAGAGATATACCTGCGTTGTCGAGAATTATCAACAGCCACCGAGGAGATGCTGTCATGCAAGCAACAATGTCCTAAGAACTTAGAATGTGGCCACCGCTGCCGTAACACATGTCATTCAGGAGCTTGCGGCAACCAAGTGTGCACTAAGAAGACCAAGGTACACTGCCCATGCGGTAATATAAAGAAGGATGCTCCTTGCAACTCGGTAAGAAACGGAGACACAGCAATATTGTGTGACAAAACCTGCGAAGCTAAGAAGATTGCTACTCAAATAGAGCATGAAAAAGAGAAACAGAGATTAAAAGAGTTAGAAGAAGAGAAGAATCGTAAAGAGTTAGCGGAGTATGAGTGGAAGTTGAGCGGAAAAAAGAAGAAATATAAGGAGAAGAAGATGGTAGTCGGTAAGGATGACCGAGGTTTCTTGAAGCGGTATTGGGTATCAATATTGTCATTCCTAGTTATGATGCTAGCGGCTATTTATTATATATTTTATGTATGA
Protein Sequence
MARRYRDAAAKLQLNVQKHLKEMKDLSSSEDEDPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEVISGRAVTCLICIGSIKKIHAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESHGPISVIKQQKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPHHPWLIPHTCGEVCEKRLSTGENCKHRCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQLCKKNLLCKTHKCENVCHAGDCPECSYTSIQTCQCGTEKAKRPCSDPLWQCKKPCNKLFSCGYHKCERICHSGNCGSCPNSGMLSCPCGANQRFVQCPDVMETCLGTCGKKHADCEHNCPEKCHNGNCPPCQVMVAKECHCSTHTRSLPCSKDFKCDTKCRGIRPCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCSLPCKIKYKCGHSEENTHSCHFGDCPPCKAICYKQYPKCTHQCKAVCHEYVAVVFKQIEKPATPWEVQPPKTKIMTLECPPCDTPIPIVCFGEHEMDNQPCHSATRRPCGRECGRPLACGNHKCTLLCHLYTPNPEYPNVPSSCKQCNRECSVPRPNKCAHKCPIRACHPGPCRPCEILERVACNCGITEIYLRCRELSTATEEMLSCKQQCPKNLECGHRCRNTCHSGACGNQVCTKKTKVHCPCGNIKKDAPCNSVRNGDTAILCDKTCEAKKIATQIEHEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVSILSFLVMMLAAIYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00072400;
80% Identity
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