Asol064184.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
-
Assembly
GCA_963170755.1
Location
OY720677.1:99139552-99143469[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-11 9.4e-10 41.2 0.0 1 37 136 172 136 180 0.93

Sequence Information

Coding Sequence
ATGGAAGCTGAAATTCTAGACATCATACAGGAGGAAGATATTAGCTGTAAAACGATTATGGCTAATGACATAAAAGATAATGTTGATCATGACCATATCAACAGTTTTAGAATCCTACATATTAACATAAGAAGTATTAGAAAAAAGTTTGATGACTTTTTGGCGTTCTTGAAGACATACGACCTTTATTACGAAATTATTGTTCTGAGTGAGACATGGATATTACCTACATGTGCTCTGTTTAAAATTAATGGATACAACACTCACTATAACAAGGCCACTTATAATCAAAATGATGgagtattaatttatattaaggaCACAGTTGAAGCAGAAGTTACACACAACGAACTTCCGATTAGTCAAgaaatgGGGAAGGAAAAAGCTACAGATCCAAGAAAATGGACagaagaaaatatgaaaaaagcTATAGAAGATGTCATGAGCAAGAAAATGGGAGTTAATGAAGCTAGCCGGACAtatgaaataccatcaagaacCTTACGTAGACACATCCTGAAAGGCTGGGATAGCAAGCAGAATATAGGTAGACCTTCGGAATTAGGACATGAAAATGAATTGAGACTCGTAGCTCACATCAAACGTCTCGAATCCATCGGATTTCCTCTAGAACAAACAAGACTGCAGTCTATTGCTTACGACTTTGCTGAAAAACTAGAATTACCTCATCGATTCAATAAGGAGAAAAAACAAGCTGGATGGGATTGGTTCCAAGGGTTCATGAAGAGGCATCCAGAGCTAAGTAAAAGAAAAGCGGAAGGCCTGTCTCTGGCGAGAGCTACTGGTATGAATCGACAGGATGTCAATAATTATTTTGAGATGTTGCTGAAAGTGTTGACTGAAAATGATTTAATTGGTAAGCCTGAAAGAATTTTCAACATGGACGAAAGTGGCATTCAAATTAACAATAAAGCTGGAATCGTAGTAGCTAGCAAGGGTGCAAAATGTGTTAATTCTGTAACCAGCGCTGAAAAAGGTGAACATATTTCTATAATTGCATGCTGCAATGCTGAGGGCACTTTTCTTCCCCCCGTTTTGATATTTAAAGGTAAATACAAAAAACTTGAATTTTCTGAAGGGCTGCCGCCAGGATCAGATGTTTTTATGAATCAAAAATCATCTTACATCAACGCTGATCTATTCTACAACTGGATGAAAGATCATTTTATTCCACGAAAGTCAGACGGGAAAGTTCTTCTGATTCTTGATGGCCATTCCTCCCATTCGAATTCATATAAAATGCTACAGTTAGCTAAAGAAAACGAAATAATTTTGCTTTGTCTACCTAGCCACACTACTCAGGCTCTACAACCTTTAGACAAAAGTTTTTTCAAGCCTTTTAAAAGCTACCTATCCAAAGCAGTAACCACTTGGTTTATAAACAacaaagaaaggaatttaaaccGACACCACATTTCAAAACTAATTGGTGAAGCCTGGTACAACTCTGCAATTCCAGCAATCGGTGTTTCAGGATTTAAAGCAACAGGGATATATCCCTATGATCCAAACATTGTTCCTGACTATTTCTTCAGCGTTTCTGATGCAGCAGTTAGAAACAGTCCTGACAATATTCAAAAGAATGACCTTTCTTTGCCGAGTACTTCAACATCTTCAATAAATCAGAGTGACCAGATTGCACACGCTTCTAATGTTTTACAGAAAGAAACACCAACTAAGACCTTACAAATAGTGAGTCCTTTGCCTGTTTTACGTCATAAAACCAGTAAAAGGAAACAGAATGTTAAGATTTTGACATCAGAAACACATTTAGCAACTCGTAAACTCTTTGAAGACAAAAAGAAGTCGCAGGAGAAACACTTGGCAGCACCAGCAAAACGTAAGAAGAATGTTGCAAAAGTGTCTTCATCATCGGAAAGTGAAGAAGAGTTACAGCTCAGTGAATCAAGTGAAGAATGTTCTGTTGAAAATGAAAACACTTGTGTAGAATGTCTCGAATCTTACTTCCATACAAAGAAAAAAAGTGACTGGATCCAGTGTTTGCAGTGTTCTGGCTGGTTGCATGAAGATTGCTCAAACTTTCCAGAGAAATGCAACAAGTGCGGTGACCAAAATAAAGGAAAAGGAAAAGGCAAGAAGACTAAAAAATGA
Protein Sequence
MEAEILDIIQEEDISCKTIMANDIKDNVDHDHINSFRILHINIRSIRKKFDDFLAFLKTYDLYYEIIVLSETWILPTCALFKINGYNTHYNKATYNQNDGVLIYIKDTVEAEVTHNELPISQEMGKEKATDPRKWTEENMKKAIEDVMSKKMGVNEASRTYEIPSRTLRRHILKGWDSKQNIGRPSELGHENELRLVAHIKRLESIGFPLEQTRLQSIAYDFAEKLELPHRFNKEKKQAGWDWFQGFMKRHPELSKRKAEGLSLARATGMNRQDVNNYFEMLLKVLTENDLIGKPERIFNMDESGIQINNKAGIVVASKGAKCVNSVTSAEKGEHISIIACCNAEGTFLPPVLIFKGKYKKLEFSEGLPPGSDVFMNQKSSYINADLFYNWMKDHFIPRKSDGKVLLILDGHSSHSNSYKMLQLAKENEIILLCLPSHTTQALQPLDKSFFKPFKSYLSKAVTTWFINNKERNLNRHHISKLIGEAWYNSAIPAIGVSGFKATGIYPYDPNIVPDYFFSVSDAAVRNSPDNIQKNDLSLPSTSTSSINQSDQIAHASNVLQKETPTKTLQIVSPLPVLRHKTSKRKQNVKILTSETHLATRKLFEDKKKSQEKHLAAPAKRKKNVAKVSSSSESEEELQLSESSEECSVENENTCVECLESYFHTKKKSDWIQCLQCSGWLHEDCSNFPEKCNKCGDQNKGKGKGKKTKK