Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: RE1
Assembly: GCA_963170755.1
Location: OY720675.1:124817095-124819648[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-11 9.2e-10 41.3 0.0 1 37 121 157 121 165 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-11	9.2e-10	41.3	0.0	1	37	121	157	121	165	0.93

Sequence Information

Coding Sequence: ATGGATGATCCTATTACCGTGGAGGAGGCACTCTCAAGAACTGATTCAGAAATTTGGCAAAAGGCTATGTCTGAGGAAATAGAAACTTTTGAAGAAAACAAAGCCTGGGAAATAGTGAATCGGCCACCAGATTCTTCAGCTACGTTGGTGAAGTGCAAGTGGGTGTTCAAGAAAAAGATAAACTGTGAAGGTGAAGTGAGGTATCGTGCTAGGTTGGTTGCAAAAGGGTTCACACAGAAAGAAGGAGTGGATTATGATGAAACTTTTTCTCCTGTAATAAGGTTCTCAAGTTTAAGATTATTATTTGCATTATCTGTTAGGgaaatgGGGAAGGAAAAAGCTACAGATCCAAGAAAATGGACagaagaaaatatgaaaaaagcTATAGAAGATGTCATGAGCAAGAAAATGGGAGTTAATGAAGCTAGCCGGACAtatgaaataccatcaagaacCTTACGTAGACACATCCTGAAAGGCTGGGATAGCAAGCAGAATATAGGTAGACCTTCGGAATTAGGACATGAAAATGAATTGAGACTCGTAGCTCACATCAAACGTCTCGAATCCATCGGATTTCCTCTAGAACAAACAAGACTGCAGTCTATTGCTTACGACTTTGCTGAAAAACTAGAATTACCTCATCGATTCAATAAGGAGAAAAAACAAGCTGGATGGGATTGGTTCCAAGGGTTCATGAAGAGGCATCCAGAGCTAAGTAAAAGAAAAGCGGAAGGCCTGTCTCTGGCGAGAGCTACTGGTATGAATCGACAGGATGTCAATAATTATTTTGAGATGTTGCTGAAAGTGTTGACTGAAAATGATTTAATTGGTAAGCCTGAAAGAATTTTCAACATGGACGAAAGTGGCATTCAAATTAACAATAAAACTGGAATCGTAGTAGCTAGCAAGGGTGCAAAATGTGTTAATTCTGTAACCAGCGCTGAAAAAGGTGAACATATTTCTATAATTGCATGCTGCAATGCTGAGGGCACTTTTCTTCCCCCCGTTTTGATATTTAAAGGTAAATACAAAAAACTTGAATTTTCTGAAGGGCTGCCGCCAGGATCAGATGTTTTTATGAATCAAAAATCATCTTACATCAACGCTGATCTATTCTACAACTGGATGAAAGATCATTTTATTCCACGAAAGTCAGACGGGAAAGTTCTTCTGATTCTTGATGGCCATTCCTCCCATTCGAATTCATATAAAATGCTACAGTTAGCTAAAGAAAACGAAATAATTTTGCTTTGTCTACCTAGCCACACTACTCAGGCTCTACAACCTTTAGACAAAAGTTTTTTCAAGCCTTTTAAAAGCTACCTATCCAAAGCAGTAACCACTTGGTTTATAAACAacaaagaaaggaatttaaaccGACACCACATTTCAAAACTAATTGGTGAAGCCTGGTACAACTTTGCAATTCCAGCAATCGGTGTTTCAGGATTTAAAGCAACAGGGATATATCCCTATGATCCAAACATTGTTCCTGACTATTTCTTCAGCGTTTCTGATGCAGCAGTTAGAAACAGTCCTGACAATATTCAAAAGAATGACCTTTCTTTGCCGAGTACTTCAACATCTTCAATAAATCAGAGTGACCAGATTGCACACGCTTCTAATGTTTTACAGAAAGAAACACCAACTAAGACCTTACAAATAGTGAGTCCTTTGCCTGTTTTACGTCATAAAACCAGTAAAAGGAAACAGAATGTTAAGATTTTGACATCAGAAACACATTTAGCAACTCGTAAACTCTTTGAAGACAAAAAGAAGTCGCAGGAGAAACACTTGGCAGCACCAGCAAAACGTAAGAAGAATGTTGCAAAAGTGTCTTCATCATCGGAAAGTGAAGAAGAGTTACAGCTCAGTGAATCAAGTGAAGAATGTTCTGTTGAAAATGAAAACACTTGTGTAGAATGTCTCGAATCTTACTTCCATACAAAGAAAAAAAGTGACTGGATCCAGTGTTTGCAGTGTTCTGGCTGGTTGCATGAAGATTGCTCAAACTTTCCAGAGAAATGCAACAAGTGCGGTGACCAAAATAAAGGAAAAGGAAAAGGCAAGAAGACTAAAAAATGA
Protein Sequence: MDDPITVEEALSRTDSEIWQKAMSEEIETFEENKAWEIVNRPPDSSATLVKCKWVFKKKINCEGEVRYRARLVAKGFTQKEGVDYDETFSPVIRFSSLRLLFALSVREMGKEKATDPRKWTEENMKKAIEDVMSKKMGVNEASRTYEIPSRTLRRHILKGWDSKQNIGRPSELGHENELRLVAHIKRLESIGFPLEQTRLQSIAYDFAEKLELPHRFNKEKKQAGWDWFQGFMKRHPELSKRKAEGLSLARATGMNRQDVNNYFEMLLKVLTENDLIGKPERIFNMDESGIQINNKTGIVVASKGAKCVNSVTSAEKGEHISIIACCNAEGTFLPPVLIFKGKYKKLEFSEGLPPGSDVFMNQKSSYINADLFYNWMKDHFIPRKSDGKVLLILDGHSSHSNSYKMLQLAKENEIILLCLPSHTTQALQPLDKSFFKPFKSYLSKAVTTWFINNKERNLNRHHISKLIGEAWYNFAIPAIGVSGFKATGIYPYDPNIVPDYFFSVSDAAVRNSPDNIQKNDLSLPSTSTSSINQSDQIAHASNVLQKETPTKTLQIVSPLPVLRHKTSKRKQNVKILTSETHLATRKLFEDKKKSQEKHLAAPAKRKKNVAKVSSSSESEEELQLSESSEECSVENENTCVECLESYFHTKKKSDWIQCLQCSGWLHEDCSNFPEKCNKCGDQNKGKGKGKKTKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00065339;
90% Identity: iTF_00784320;
80% Identity: -