Hzea017354.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- -
- Assembly
- GCA_002150865.1
- Location
- KZ117734.1:12785-14551[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-13 1.2e-10 41.0 0.0 1 37 13 49 13 58 0.89
Sequence Information
- Coding Sequence
- atggGGAAGGAAAAAGCTGCAGATCCAAGAAATTGGAcagaagaaaatatgaaaaaagctATAGAAGATGTCATTAGCAAGAAAATGGGAGTTAATGAAGCTAGCCGGACATATGAAATACCATCAAGAACCTTACGTCGACACATCCTAAAAGGCTGGAATAGCAAGCAGAATATAGGTAGACCTTCAGAATTAGGACATGAAAATGAATTGAGACTTGTAGCTCACATCAAACGTCTCGAATCCATCGGATTTCCTCTAGAACAATCAAGACTGCAGTCTATTGCTTACGACTTTGCTGAAAAACTAGAATTACCTCATCGATTCAATAAGGAGAAGAAACAAGCTGGATGGGATTGGTTCCAAGGGTTCATGAAAAGGCATCCAGAGCTAAGTAAAAGAAAAGCGGAAGGCCTGTCCCTGGCGAGAGCTACTGGTATGAATCGACAGGAtgtcaataattattttgagatGTTGTTGAAAGTGTTGACTGAAAATGATTTACTTGGTAAgcctgaaagaattttcaacatGGACGAAAGTGGCattcaaattaacaataaaactggAATCGTAGTAGCCAGCAAGGGTGCAAAATGTGTTAATTCTGTAACCAGCGCTGAAAAAGGTGAACATATTTCTATAATTGCATGCTGCAATGCTGAGGGCACATTTCTTCCCCCCGTTTTGATATTTAAaggtaaatacaaaaaacctGAATTTTCTGAAGGTCTGCCGCCAGGATCAGATGTTTTTATGAATCAAAAATCATCTTACATCAACGCTGATCTATTCTACAACTGGATGACAGATCATTTTATTCCACGAAAGTCAGACGGGAAAGTTCTTCTGATTCTTGACGGCCATTCCTCTCATTCGAATTCATATAAAATGCTACAGTTAGCTAAAGAAAACGAAATAATCTTGCTTTGTCTACCTAGCCACACTACTCAGGCTCTACAACCTTTAGACAAAAGTTTTTTCAAGCCTTTCAAAAGCTACCTGTCCAAAGCAGTAACCACTTGGTTTATAAACAACAAAGAAAGGCATTTAAACCGACAGCACATTTCAAAACTAATCGGTGAGGCCTGGTATAAGTCTGCAATTCCAGCAATTGGTGTTTCAGGATTTAAAGCAACAGGGATATATCCCTATGATCCAAACATTGTTCCTGACTATTTCTTCAGCGTTTCTGATGCGGCAGTTAGAACCAGTCCTgacaatattcaaaataatgacCTTTCTTTGCCGAGTACTTCAACATCTTCAATAAATCAGAGCTATCAGATTGCACACGCTTCTGATGTTTTAGAGAAAGAAACACCAACTAAGACTTTACAAACAGTGAGTCCTTTGCCTGTTTTACGTCATAAAACCAGTAAAAGAAAACAGAACGTTAAGATTTTGACATCAGAAACACATTTAGCTACTCGTAAACTctttgaagaaaaaaagaagTCGCAGGGTAAGAAACACTTGGCAGCACCAGCAAAACGTAAGAAGAATGTTGTAGAAGTGTCGTCATCATCGGAAAGTGAAGAAGAGTTACACCTCAGTGAATCAAGTGAAGAATGTTcagatgaaaatgaaaacacTTGTGTAGAATGTCTCGAATCTTACTTTCACACAAAGAAGAAAAGTGACTGGATCCAGTGCTTGCAGTGTTCTGGCTGGTTGCATGAAGATTGCTCAAACTTCCCAGAGAAATGCAACAAGTGCGGTGACCAAAATAAAGGGAAAGGAAGAGGAAAGAAGACTCAAAAATGA
- Protein Sequence
- MGKEKAADPRNWTEENMKKAIEDVISKKMGVNEASRTYEIPSRTLRRHILKGWNSKQNIGRPSELGHENELRLVAHIKRLESIGFPLEQSRLQSIAYDFAEKLELPHRFNKEKKQAGWDWFQGFMKRHPELSKRKAEGLSLARATGMNRQDVNNYFEMLLKVLTENDLLGKPERIFNMDESGIQINNKTGIVVASKGAKCVNSVTSAEKGEHISIIACCNAEGTFLPPVLIFKGKYKKPEFSEGLPPGSDVFMNQKSSYINADLFYNWMTDHFIPRKSDGKVLLILDGHSSHSNSYKMLQLAKENEIILLCLPSHTTQALQPLDKSFFKPFKSYLSKAVTTWFINNKERHLNRQHISKLIGEAWYKSAIPAIGVSGFKATGIYPYDPNIVPDYFFSVSDAAVRTSPDNIQNNDLSLPSTSTSSINQSYQIAHASDVLEKETPTKTLQTVSPLPVLRHKTSKRKQNVKILTSETHLATRKLFEEKKKSQGKKHLAAPAKRKKNVVEVSSSSESEEELHLSESSEECSDENENTCVECLESYFHTKKKSDWIQCLQCSGWLHEDCSNFPEKCNKCGDQNKGKGRGKKTQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065339;
- 90% Identity
- iTF_00065318; iTF_00065572; iTF_00065339; iTF_00065320; iTF_00065473; iTF_00065315; iTF_00065316; iTF_00065286; iTF_00147239; iTF_00147240; iTF_00147241; iTF_00065292; iTF_00307500; iTF_00065293; iTF_00307501; iTF_00065294; iTF_00307502; iTF_00065295; iTF_00065296; iTF_00065297; iTF_00065298; iTF_00065299; iTF_00065300; iTF_01424980; iTF_00065301; iTF_00065302; iTF_00065303; iTF_01424984; iTF_00065369; iTF_00065308; iTF_00065310; iTF_00065311; iTF_00065312; iTF_00065281; iTF_00065288; iTF_00065291; iTF_00065327; iTF_01487643; iTF_00065305; iTF_00065307; iTF_00065406; iTF_00640213; iTF_00065272; iTF_00065274; iTF_00065343;
- 80% Identity
- -