Ajug011848.1
Basic Information
- Insect
- Amorpha juglandis
- Gene Symbol
- clz9
- Assembly
- GCA_949126905.1
- Location
- OX421378.1:8873371-8875497[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-08 1.8e-05 24.8 0.0 6 38 20 52 18 56 0.89 2 2 7.5 5.3e+03 -2.4 0.0 21 29 356 364 356 365 0.82
Sequence Information
- Coding Sequence
- ATGGTGAGAACATATAAACGCAAAACGGAAAGAACTTCCATCGATGAAGTGTCTGTAGCTTCTGCGATATCTGACGTTATGGAAGGAAAACTATCAATAAGAAAAGCTGCTgataaatataacttaaaaccTGCAACTTTACAACACAGAATTGAAAATAAGAAGAAAAATGCAGGAGAACGGAGTTTTTTATCAAAGTACGCCTCCCAACAAGTATTCACAATTGAACAAGAGAAGCAATTAAATGAATATGTTGTAAAATGCAGTAAAATGCACTATGGGCTTACATTAACTCAAGTGCGAAAGCTTGCTTACGAATAcgccaataaattaaattgcagTTATCCACCGTCTTGGGATATCAATAAAATTGCTGGTTTAGATTGGATATATGGTTTTCGtaagagaaataataatattagtttaaggAAACCCGAGAACACGAGCGTTGCTCGatcattttcttttaataagACTGCCGTGGAAACCTTCTTTAATAATTTAGAAAATGTTCTCGCAAGATATAATTTTACAGCTGATCGAattgttaattttgatgaaACCGGCATTACAACGGTTTTAAATACTCCAAAGATATTGGCAGACAAAACTCAACGCCAAATCGGCCAAATTGTGTCTGCAGAGAGAGGCGAATTGGTGACATTTGGAGGAATAATTGTTGGTACTGGCAATAGTATTCCACCAGTTTATGTATTTCCCAGGGTTCATTATAAAACCCACTTTTTAAATGGCGCCTCGGAAGGATCTTTGGGCTTATCATCAAGGTCTGGTTGGATAAACAGTGAGCTATTTATAGAGGTTCTTAAACATATTCAAAAACATACAAATTGCACAAAAGAAAGGCCGATTCTTCTTATTTGTGATAATCACGAGTCTCATATATCTGTCGAAGCAATTAATTATTCACGTGATAATGGAATCGTTTACTTGTCGTTTCCTCCACACACTTCCCACAAACTCCAACCTCTTGATGTTGGTGTGTTCGGCCCATTTAAAGCAAAGCTCAAAGTAGCTTTTAATGATTGGCATATTAATCACCCTGGGAAAGCTTTAACGATTTATGATATTCCAAGTCTTTCTAAGTTGGCTTTTTTTGAATCATTcaatgcaaaaaatattacGAGCGCATTCGCTAAGCCTGGAATCCTGCCATTTAATAAATTGGCATTTTCAGATGAAGATTATTCTCCTTGTGAGATTTATAGCAACCAAGAATCACAAGATGGTCCTACTAACGATTCCAATTGTACCAATCCTGCTGATCCCGAATTAACAATAATGAACGAGCAATGTGCCACACCAACACCTGCTCAAGAGCCAAAAAATAGTTCGGATGTTTTTGAAATTCATAATATGCCTTCTACATCAGGTGCTTTTGATAGATCTAACAAAACACCAATGACCAATCAATGCATAACTCCTGAAATTATAAGACCTTACCCAAAAATTAACCAGAAAAATACAACAAGAAAAGGAAAAGGGAAGGGTAAATCACGAATTTACACAGATACTCCAGAAAAGAAAAGGATAGAAGAACTACAAAAGGCTAAGGAGGAAGCAAacctaaaaaaagaaaaaagaaaacgtGCAAAGGAACTGAAAACTGCACAAAATTTGCTAAGCATCATTGTTGATCCTATCAAAAAGTCAGGCAAAAGGACTAGGGCTATAACTATGGAATCAGAGTCTTCAAACTCTTCCACTGAAATTTTATTACAGGAATCATTGGATTCTGAAGAATCCAACATGGAATTATCTGATGTTGACATTGTTAATACTACCCCACCTGCGGCAAATGATCTTCAGGATGGTGACtttgttataataaaagtaGTTAACGTAGGAAAGAAGCATTCTTTTAAACattttgttggaaaaataatatcaaggcACGAAGAGGGTCAAGGAAACGACTTTTTAGtctcttttttgaagcttaaacCATCTGGAACTTTCGTATTCCCTACTATAATAGATGAAGCTTCGGTTAATATATCTGATATTGTTTTGAAGCTACCGAACCCTATAGTAAAGAAAGGCACTAGCAGAACAGCTTCcctgtttaattttaaaataaatttgtctcCTTATCACATTTCAATGTAA
- Protein Sequence
- MVRTYKRKTERTSIDEVSVASAISDVMEGKLSIRKAADKYNLKPATLQHRIENKKKNAGERSFLSKYASQQVFTIEQEKQLNEYVVKCSKMHYGLTLTQVRKLAYEYANKLNCSYPPSWDINKIAGLDWIYGFRKRNNNISLRKPENTSVARSFSFNKTAVETFFNNLENVLARYNFTADRIVNFDETGITTVLNTPKILADKTQRQIGQIVSAERGELVTFGGIIVGTGNSIPPVYVFPRVHYKTHFLNGASEGSLGLSSRSGWINSELFIEVLKHIQKHTNCTKERPILLICDNHESHISVEAINYSRDNGIVYLSFPPHTSHKLQPLDVGVFGPFKAKLKVAFNDWHINHPGKALTIYDIPSLSKLAFFESFNAKNITSAFAKPGILPFNKLAFSDEDYSPCEIYSNQESQDGPTNDSNCTNPADPELTIMNEQCATPTPAQEPKNSSDVFEIHNMPSTSGAFDRSNKTPMTNQCITPEIIRPYPKINQKNTTRKGKGKGKSRIYTDTPEKKRIEELQKAKEEANLKKEKRKRAKELKTAQNLLSIIVDPIKKSGKRTRAITMESESSNSSTEILLQESLDSEESNMELSDVDIVNTTPPAANDLQDGDFVIIKVVNVGKKHSFKHFVGKIISRHEEGQGNDFLVSFLKLKPSGTFVFPTIIDEASVNISDIVLKLPNPIVKKGTSRTASLFNFKINLSPYHISM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433089; iTF_00736567; iTF_00433082; iTF_00433083; iTF_01079836; iTF_00432096; iTF_00433088; iTF_01090690; iTF_00433094; iTF_00433086; iTF_00433087; iTF_00931167;
- 90% Identity
- -
- 80% Identity
- -