Dpun000062.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- clz9
- Assembly
- GCA_012273795.1
- Location
- CM022542.1:1735162-1737770[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-07 7.1e-05 22.8 0.0 6 38 20 52 18 57 0.88 2 2 3.9 2.7e+03 -1.4 0.0 21 30 357 366 357 367 0.83
Sequence Information
- Coding Sequence
- ATGGTTAGAACATTCAAACGCAAAACGGAGAGAACTTTCATCGATGAAATTTCTGTGGCTTCTGCGATATCTGATGTGTTGAAAGGAGAATTATCAATAAGAAAAGCAGccgataaatataatttaaaacctgCAACTCTACAGCATAGaattgaaaaaaagaagaataaagaCTGCGAAGGCATGAGTTTTTCGTCTAAGTATACCTCCAAGCAAGTATTTACAACCGAACAAGAAGACCAACTAAatgcttatataataaaatgcagTAAAATGCATCATGGGCTTACATTAACTAAAGTGCGGCAGCTTGCTTACGAATAcgctaaaaaattaaattgcagCTATCCACCAATTTGGAATGTCAATAAAAGTGCTGGCTTGGATTGGACATATGGTTTTcgtaagagaaataaaaatattagtttaaggAAACCCGAGAACACAAGTGTTGCCCgatcattttcatttaataagaCTGCcgttgaaaccttttttaataatttagaagatGTTCTCGCAAGATTTAAGTTTACAGCTAACCGTATTATTAATTTCGATGAAACCGGCATTACAACGGTTATGAATACTCCAAAGATATTGGCAGAAAAAACTCAACGTCAAATCGGCCAAATTGTTTCTGCAGAGAGAGGCGAGTTGGTGACATTTGGAGGAATCATTACTGGAACGGGCAATAGTATTCCACCTATATATGTGTTTCCCAGGGTTCATTACAAAAGCCATTTTTTAAATGGTGCTCCTGAAGGGTCTTTGGGCTTATCGTCTAGATCTGGTTGGATAAATAGTGAATTATTTATAGAGGTCCTTAAACATATCCAAAAACACACAAATAGCACAAAGGAAAGACCGATTCTTCTAATTTGTGACAATCATGAGTCCCATATTTCAGTCGAAGCAATTAATTATTCACGTGAAAATGGAATTGTTTATTTATCGTTTCCTCCACACACATCTCACAAACTCCAACCTCTTGATGTCGGTGTTTTCAGCCCGTTTAAAGCAAAACTCAAAGTAGCCTTCAATGACTGGCACATTAATCACCCTGGGAAAGCGTTAACTATTTATGATATTCCAAATCTTTCTAAGTTGGCATTTTTTGAATCTTTCAACGCGAAAAATATTACGAGCGCGTTTGCGAAGCCTGGAATCGTGCCATTTAATAGATTGGCATTTTCTGAAGAAGATTTTTCTCCTTGTGATGTTTATAGCAACCAAGAATCCCAAAATGATCCTACAAATGATTCTAGTGCCAATCCTATTGATCCCGAATTAACAATAGAGAGCGAGCAATGTATAACACCACCTTCCACTAGAGAGCCACCAAATATCATGAATGATTTTGAGTTACATAATATGCCTTCAACGTCAAGAGCTTCTGATGGAATTAATGAAACACTCGCAACTAAACCATGCATAACTCCTGAAGTTATAAGGCCTTATCCAAAAATTTTCCGAAACAATATAAttagaaaaggaaaaataaaggGTAAATCACGAATTTATACAGATACTCCagaaaaacaaagaatagaagAACTGCAAAGAGCTAAGAATGAAGCAAACCTAAAAAAAGAACAACGAAAACGCGCAAAAGATCTGAAAACTGCTCAAAATTTGTTAGGCATAACTGTTAATCCCATCAAGAAACTAAATAAAAGGACAAGAGCTATATCTATGGAATCAGACTCTTCAAACTCttctactaatattttattacaggaaTCATTCGATTCTGAAAGATCTACCATGGAGTCATCTGATGATGATATTGTTAATACTGCCCCACCTGCAGCAAATGATCTTCGTGATGGTGACTATGTTATAACAATGGTAATTAACGTAAGAAAGAAGCAACCTTATAAGCATTTTGTTGGAAAAATAGTGTCAAGATACCCTGATAGCCAGAACGACTTTCTAGTctcttttttaaagcttaaaccGACTGGAACTTTTTTGTTCCCTGATGTAAAAGACGAAGCTTCGGTTAATATTTCTGATATTGTGCTGAAGTTACCGAATCCTACAGTAAAGAAAGGCACTAGTAGAACAGCTTCTCTATtcaattttaagataaatttgtCACCTTACAACATTTCAATGTAA
- Protein Sequence
- MVRTFKRKTERTFIDEISVASAISDVLKGELSIRKAADKYNLKPATLQHRIEKKKNKDCEGMSFSSKYTSKQVFTTEQEDQLNAYIIKCSKMHHGLTLTKVRQLAYEYAKKLNCSYPPIWNVNKSAGLDWTYGFRKRNKNISLRKPENTSVARSFSFNKTAVETFFNNLEDVLARFKFTANRIINFDETGITTVMNTPKILAEKTQRQIGQIVSAERGELVTFGGIITGTGNSIPPIYVFPRVHYKSHFLNGAPEGSLGLSSRSGWINSELFIEVLKHIQKHTNSTKERPILLICDNHESHISVEAINYSRENGIVYLSFPPHTSHKLQPLDVGVFSPFKAKLKVAFNDWHINHPGKALTIYDIPNLSKLAFFESFNAKNITSAFAKPGIVPFNRLAFSEEDFSPCDVYSNQESQNDPTNDSSANPIDPELTIESEQCITPPSTREPPNIMNDFELHNMPSTSRASDGINETLATKPCITPEVIRPYPKIFRNNIIRKGKIKGKSRIYTDTPEKQRIEELQRAKNEANLKKEQRKRAKDLKTAQNLLGITVNPIKKLNKRTRAISMESDSSNSSTNILLQESFDSERSTMESSDDDIVNTAPPAANDLRDGDYVITMVINVRKKQPYKHFVGKIVSRYPDSQNDFLVSFLKLKPTGTFLFPDVKDEASVNISDIVLKLPNPTVKKGTSRTASLFNFKINLSPYNISM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063523;
- 90% Identity
- iTF_00433086;
- 80% Identity
- -