Dpun016361.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- clz9
- Assembly
- GCA_012273795.1
- Location
- CM022554.1:4369364-4371974[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-07 0.00022 21.2 0.0 9 38 23 52 20 57 0.88
Sequence Information
- Coding Sequence
- ATGGTTAGAACATTCAAACGCAAAACGGAGAAAACTTTCATCGATGAAATTTCTGTGGCTTCTACGATATCTGATGTGTTGAAAGGAGAATTATCAATAAGAAAAGCAGccgataaatataatttaaaagctgCAACTCTACAGCATAGaattgaaaaaaagaagaataaagaCTGCGAAGGCATGAGATTTTCGTCTAAGTATACCTCCAAGCAAGTATTTACAACCGAACAAGATGACCAACTAAatgcttatataataaaatgcagTAAAATGCATCATGGGCTTACATTAACTAAAGTGCGGCAGCTTGCTTACGAATAcgctaaaaaattaaattgcagCTATCCACCATTTTGGAATGTCAATAAAAGTGCTGGCTTGGATTGGACATATGGTTTTcgtaagagaaataaaaatattagtttaaggAAACCCGAGAACACAAGTGTTGCCCgatcattttcatttaataagaCTGCcgttgaaaccttttttaataatttagaagatGTTCTCGCAAGATTTAAGTTTACAGCTAACCGTATTATTAATTTCGATGAAACCGGCATTACAACGGTTATGAATACTCCAAAGATATTGGCAGAAAAAACTCAACGTCAAATCGGCCAAATTGTTTCTGCAGAGAGAGGCGAGTTGGTGACATTTGGAGGAATCATTACTGGAACTGGCAATAGTATTCCACCTATATATGTGTTTCCCAGGGTTCATTACAAAAGCCATTTTTTAAATGGTGCTCCTGAAGGGTCTTTGGGCTTATCGTCTAGATCTGGTTGGATAAATAGTGAATTATTTATAGAGGTCCTTAAACATATCCAAAGACACACAAATAGCACAAAGGAAAGACCGATTCTTCTAATTTGTGACAATGATGAGTCCCATATTTCAGTcgaagcaataaattattcacgTGAAAATGGAATTGTTTATTTATCGTTTCCTCCACACACATCTCACAAACTCCAACCTCTTGATGTCGGTGTTTTCAGCCCGTTTAAAGCAAAACTCAAAGTAGCCTTCAATGACTGGCACATTAATCACCCTGGGAAAGCtgCCAATCCTATTGATCCCGAATTAACAATAGAGAGCGAGCAATGTATAACACCACCTTCCACTAGAGAGCCACCAAATATCATGAATGATTTTGAGTTACATAATATGCCTTCAACGTCAAGAGCTTCTGATGGAATTAATGAAACACTCGCAACTAAACCATGCATAACTCCTGAAGTTATAAGGCCTTATCCAAAAATTTTCCGAAACAATACAATCAGAAAAGGAAAAGTAAAGGGTAAATCACGAATTTATACAGATACTCCagaaaaacaaagaatagaagAACTGCAAAGAGCTAAGAATGAAGCAAACCTAAAAAAAGAACAACGAAAATGCGCAAAAGATCTGAAAACTGCTCAAAATTTGCTAGGCATAACTGTTAATCCCATCAAGAAACTAAATAAAAGGACAAGAGCTATATCTATGGAATCAGACTCTTCAAACTCttctactaatattttattacaggaaTCATTCGATTCTAAAAGATCTACCATGGAGTCATCTGATGATGATATTGTTAATACTGCCCCACCTGCAGCAAATGATCTTCGTGATGGTGACTATGTTATAACAATGGTAATTAACGTAAGAAAGAAGCAACCTTATAAGCATTTTGTTGGAAAAATAGTGTCAAGATACCCTGATAGCCAGAACGACTTTCTAGTctcttttttaaagcttaaaccGACTGGAACTTTTGTGTTCCCTGATGTAAAAGACGAAGCTTCGGTTAATATTTCTGATATTGTGCTGAAGTTACCGAATCCTACAGTAAAGAAAGGCACTAGTAGAACAGCTTCTCTATtcaattttaagataaatttgtCACCTTACAACATTTCAATGTAA
- Protein Sequence
- MVRTFKRKTEKTFIDEISVASTISDVLKGELSIRKAADKYNLKAATLQHRIEKKKNKDCEGMRFSSKYTSKQVFTTEQDDQLNAYIIKCSKMHHGLTLTKVRQLAYEYAKKLNCSYPPFWNVNKSAGLDWTYGFRKRNKNISLRKPENTSVARSFSFNKTAVETFFNNLEDVLARFKFTANRIINFDETGITTVMNTPKILAEKTQRQIGQIVSAERGELVTFGGIITGTGNSIPPIYVFPRVHYKSHFLNGAPEGSLGLSSRSGWINSELFIEVLKHIQRHTNSTKERPILLICDNDESHISVEAINYSRENGIVYLSFPPHTSHKLQPLDVGVFSPFKAKLKVAFNDWHINHPGKAANPIDPELTIESEQCITPPSTREPPNIMNDFELHNMPSTSRASDGINETLATKPCITPEVIRPYPKIFRNNTIRKGKVKGKSRIYTDTPEKQRIEELQRAKNEANLKKEQRKCAKDLKTAQNLLGITVNPIKKLNKRTRAISMESDSSNSSTNILLQESFDSKRSTMESSDDDIVNTAPPAANDLRDGDYVITMVINVRKKQPYKHFVGKIVSRYPDSQNDFLVSFLKLKPTGTFVFPDVKDEASVNISDIVLKLPNPTVKKGTSRTASLFNFKINLSPYNISM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063523;
- 90% Identity
- iTF_00433086;
- 80% Identity
- -