Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: ECU06_1150
Assembly: GCA_963922035.1
Location: OY998233.1:6471242-6475715[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 1.3 9.7 0.0 21 48 395 422 390 425 0.90

2 12 0.12 9.8e+02 0.4 0.1 22 43 509 530 505 535 0.83

3 12 0.00031 2.6 8.7 0.5 21 49 536 564 525 567 0.90

4 12 9.2e-05 0.76 10.4 0.1 20 44 625 649 611 655 0.80

5 12 0.0018 15 6.2 0.1 21 48 790 817 785 820 0.90

6 12 0.23 1.9e+03 -0.5 0.0 18 41 844 867 836 874 0.78

7 12 0.0011 9.1 6.9 0.2 20 49 902 930 897 934 0.85

8 12 0.03 2.4e+02 2.4 0.2 22 50 932 960 929 963 0.89

9 12 0.0018 14 6.3 0.0 16 46 1025 1055 1023 1060 0.89

10 12 0.12 9.8e+02 0.4 0.3 19 43 1085 1109 1078 1114 0.82

11 12 0.18 1.4e+03 -0.1 0.2 25 51 1119 1145 1110 1147 0.79

12 12 0.24 2e+03 -0.6 0.3 22 47 1144 1169 1135 1176 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	1.3	9.7	0.0	21	48	395	422	390	425	0.90
2	12	0.12	9.8e+02	0.4	0.1	22	43	509	530	505	535	0.83
3	12	0.00031	2.6	8.7	0.5	21	49	536	564	525	567	0.90
4	12	9.2e-05	0.76	10.4	0.1	20	44	625	649	611	655	0.80
5	12	0.0018	15	6.2	0.1	21	48	790	817	785	820	0.90
6	12	0.23	1.9e+03	-0.5	0.0	18	41	844	867	836	874	0.78
7	12	0.0011	9.1	6.9	0.2	20	49	902	930	897	934	0.85
8	12	0.03	2.4e+02	2.4	0.2	22	50	932	960	929	963	0.89
9	12	0.0018	14	6.3	0.0	16	46	1025	1055	1023	1060	0.89
10	12	0.12	9.8e+02	0.4	0.3	19	43	1085	1109	1078	1114	0.82
11	12	0.18	1.4e+03	-0.1	0.2	25	51	1119	1145	1110	1147	0.79
12	12	0.24	2e+03	-0.6	0.3	22	47	1144	1169	1135	1176	0.82

Sequence Information

Coding Sequence: ATGGAGATAGGAGAGCCTGCAACGTTTAAACTATCCGAGAAAACACTGTCACGTGGGACATCGAACTACAACATTCCGGACGATGATGCGGACCAAAAAAATGCAGAGAACACGGATATATCCATGGAGAATGGTGAATATACAGAGTCCAAGGAGAAGAGCTCTGGCTGGTCCAAAATCTGCAGAGTATGCGCCAATGAAAATGGTCATGTCGTTCCGATATTCGAAGGTGAAGGAGCCGAACATGACttgtgcaagaaaattcacaAATACCTTCCAATTCAGGTATCGAAAGACGATACCTTACCTGTACAGCTCTGCTACCAGTGCGCAGCAACGTTACTGGCGTGGCACGAGTTACTGGAAGGCTGCATGGAAGCTGAGAAAAAACTCGTGCGGATGGAATCTGAGCTCAAAGAGAAGGAACAGATGAAACTGAAGTATACAGAAATTGCCAGTTCTAACGGGCATGCAAGAATAATTATTGCGAACGAAGAGCTTGTCGACGATCCGGAGCCAATTGCAACTCATGGAGAGGAACTGACATGCTCAACGGAAAAATTGCGGGAGCCAAACGAGACCGTCGAACAAGCTCCTAGTCAGGAAAGCGAAGAGagGTCCGGCAAATCGAAGAAGCCATTTAAGCTATTCCTTGACACGCAAAGTATATGTCGGACGTCGAGAAGAAAAGTTAAAATCGAAGTTAGAGACGAGAAGCGTGCGACGAGAGAAAGTTCGGACGCAATATGGAGGGACGTTTTGTACACGAGCATCGAGAATCAGTTGCCGAGCCTGGAGTCGCCGGAGCATGCGAACGAGGATCTGGACTGCTGCGTCGATGAAGCATCCGCGAAAGCCGAAGAAACTGAGCTCACCTCGTCGTTAAAAATCGAGAACACGGAGAGAGAAACATTAGCATTGTGCGAGGAAGACATCGTGCGACAATCGGAATATCCGGTGTACGAAGAGTCGACGCCCGGCGATGAGTCGAGTCCCGAGGAAAGAGACGCCAGGGCAAAATGCAACGTGTGCTCTCGGGAATTTTCTCAAATAAATGATCTCTACGTTCACGCGAAGGAACACAAAGATTTGCCGGAATCGCGAAAGATCTATCAGTGCGTCGAGTGCGCCAAGAGTTTTCGTCTCAAGGACTCTTTCGTCCGTCACCTACGAATTCATCGCGACGAGCGACCGTTCACTTGTCACGTTTGCGGCAAACAATTTCGCGACTCCGGCGGTCTCTCGAGGCATCTCAAAGACGTTCACGCGAAGCTGAAGAACTTCCCTTGCGACATTTGCGGCAAGAGTTTCTCGTCGAAGGCAACGCGCGACGATCATCGACGAACCCACACGGGCGAGAGGCCTTACGTTTGCGATACTTGCAACAAATCATTCAAGTCCAAAGCTTGCCTGTACAGCCACAACAAGCTTCACACGAACGAGTTTCCGCATCCGTGCGCCTACTGCAGCAAGAAGTTCCGCCGAAGGCAGGAGATGCTCGTACACGCGACCACTCACACCGGCGAGAAGAATTACAGTTGCGACGTTTGCTACAAGCGCTTTCGCGTTAAGACCGAAGTTGTCAGACACAAATTGACTCATTCCGACGAGAAACCCTTCGTCTGCGCCAAGTGCGGTCTCAGATTTCGTCAGAATCGTTATCTCAACAACCACATTAAAACGCGACACGTTCAATCCGGTGCTGCGAGAAGATTCGAAACTTTCGTCCGAAAACGGAGAGAAGCTTCCAAGGGAAATGGCTCAGTGAAACTCGCCTCCGTGCCAAGATCGAGCCGTCGAACGCAGGTGAACTCCGTTCTTCCGACAAAAAACACGGGAGCCAAGCCAGCTTCTACGAGCGATCTTAAAAAGGTCGCTGAACAGAAAAATACCTGCGACAAGTGTTCGAGGGTCTTCAAGAGGGAATCAAATCTGAAACGGCACGTAGCGAACTGCCGCGAGAAACCGGCAAAGGATAAGAAGATCCTCTCCACGGAACGCGAACCGATCGAGAAAGAGGCCTTCGAGGAAAACTTGGATGCGGACGCTTCGGGCGAATCGACGAACCGGGATAAGTCCGACACGTGGGACGTGGGAGAATCGTCGATGAAGAAAAGACTGCCCATCTATCCGTGCGCGTACTGCGACTACacaacgagaaagaaaaaattgttgaaacttCACACGAGCGAGAATCACTCGGAGATCCCAAAGGCGAAACGCGGTCGGAAACAGCGCAGCGTGGACGAGGATCTCGTAAATCGTTCGAGGATGGAAGCGAACGGTCGTATATACTATCACTGCAACGACTGCGGAAAAAATCTCTTCTCCCCTTACACGTTCGCGTGGCACATGAGAATCCACACGGGCGAGCGGCCGTTCACTTGTCACCTGTGCGGCAAGCAGTTTCGAGTCAATCAGGGACTGGCTCGTCATCTCCGCGAGACTCACGCCGGTATAAAGAAATTCCCGTGCGATCTTTGCGGCCGAATGTTCTCGACGAAGAGGAACGTCGAGGATCATCGGCGCATTCACACGGGCGAGCGTCCGTTCGTCTGCAACGTGTGCGGCAAAGCCTTCAAGCAGAAAGCCTCGCTCTTCGTTCACAATCGAACTCACACAGATTTCTTCGCGTTCAAGTGCAGCTACTGCGAGCAGGGCTTTCGCACGAGGCCACCGCTCGTCGTGCACATGACGAAGCACACCGGCGAGAAGCCTCACTCTTGCGACATCTGCGACCGAGCTTTTCGCATAAAGTACGAACTGAAGCGCCATCGTCTGATACACTTCGACGAGAAACCCTGGCAATGCACCGACTGCGGTCTCTCCTTTCGACAGAAGCGATACCTGGTTAATCATAAGAGAGTTAATCACGCCTGCGTCCCGAGAACCTCGACCTTGGCGAGTACGATCGATCGAGCGACGGATCCAAAGCCCTCGCCGCGAGCCAAACGAACGTCGGAGCAACGTGAGGAATTGGTCCGGTCGAGGGTGAATTGCAACGGCGTTGACCGATACAAGTGTCAGGACTGCGGAAAGATTCTCTCGACCTCGTACAACTTCCTGAGCCATCGAAACAGGCACACAGGCGAGAAGCCCTTCACCTGCCACGTGTGCGGCAAGAGTTTTGGTCACGGCTCGGTCCTCAACAGGCATCTGCGCGACGTTCACGCGGGCAACAAGAACTTCCCGTGCGATCTCTGCGATCGTCGTCTAACTTCGAGAATTGCTCGGGACGAGCATCGGAGAACTCACACGAACGAGAGACCGCACGTTTGCGAGACTTGCGGCAAGTCGTTCAGACAGAGAGCATCTCTTCACGTTCACAAGAGTTTTCACACGAGCAGCTACGACCACAAGTGCAAGATATGCGAGAGAGCTTTTAAGAGAAGGCAGGAACTCGAGAAACACCTGTTGATCCACACGGGACAGAAACCGCACGAGTGCGAGATTTGCGAGAAACGCTTTCGCACGATAGGATGTCTGAGTCGTCACAAGAGGACTCACGAGAGCGCGAAGATTCACGTCTGCGAACGGTGCGGCGTGAAGTTTGGCCAGGAGCGTTATCTGAAGAATCACGCTAGAAACGTGCACGGAACGATTAAAGCCTCGCCCGCTCCTACACCGGCGTGA
Protein Sequence: MEIGEPATFKLSEKTLSRGTSNYNIPDDDADQKNAENTDISMENGEYTESKEKSSGWSKICRVCANENGHVVPIFEGEGAEHDLCKKIHKYLPIQVSKDDTLPVQLCYQCAATLLAWHELLEGCMEAEKKLVRMESELKEKEQMKLKYTEIASSNGHARIIIANEELVDDPEPIATHGEELTCSTEKLREPNETVEQAPSQESEERSGKSKKPFKLFLDTQSICRTSRRKVKIEVRDEKRATRESSDAIWRDVLYTSIENQLPSLESPEHANEDLDCCVDEASAKAEETELTSSLKIENTERETLALCEEDIVRQSEYPVYEESTPGDESSPEERDARAKCNVCSREFSQINDLYVHAKEHKDLPESRKIYQCVECAKSFRLKDSFVRHLRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFPCDICGKSFSSKATRDDHRRTHTGERPYVCDTCNKSFKSKACLYSHNKLHTNEFPHPCAYCSKKFRRRQEMLVHATTHTGEKNYSCDVCYKRFRVKTEVVRHKLTHSDEKPFVCAKCGLRFRQNRYLNNHIKTRHVQSGAARRFETFVRKRREASKGNGSVKLASVPRSSRRTQVNSVLPTKNTGAKPASTSDLKKVAEQKNTCDKCSRVFKRESNLKRHVANCREKPAKDKKILSTEREPIEKEAFEENLDADASGESTNRDKSDTWDVGESSMKKRLPIYPCAYCDYTTRKKKLLKLHTSENHSEIPKAKRGRKQRSVDEDLVNRSRMEANGRIYYHCNDCGKNLFSPYTFAWHMRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDLCGRMFSTKRNVEDHRRIHTGERPFVCNVCGKAFKQKASLFVHNRTHTDFFAFKCSYCEQGFRTRPPLVVHMTKHTGEKPHSCDICDRAFRIKYELKRHRLIHFDEKPWQCTDCGLSFRQKRYLVNHKRVNHACVPRTSTLASTIDRATDPKPSPRAKRTSEQREELVRSRVNCNGVDRYKCQDCGKILSTSYNFLSHRNRHTGEKPFTCHVCGKSFGHGSVLNRHLRDVHAGNKNFPCDLCDRRLTSRIARDEHRRTHTNERPHVCETCGKSFRQRASLHVHKSFHTSSYDHKCKICERAFKRRQELEKHLLIHTGQKPHECEICEKRFRTIGCLSRHKRTHESAKIHVCERCGVKFGQERYLKNHARNVHGTIKASPAPTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01364831;
90% Identity: iTF_00058873;
80% Identity: iTF_00058873;