Scul022560.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- ECU06_1150
- Assembly
- GCA_964017025.1
- Location
- OZ024781.1:10005509-10009984[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0071 0.69 10.9 1.2 2 23 339 360 339 360 0.97 2 23 2.7e-05 0.0026 18.5 0.8 1 23 370 392 370 392 0.99 3 23 2.9e-06 0.00028 21.6 1.1 1 23 398 421 398 421 0.95 4 23 1.2e-05 0.0012 19.7 0.6 1 23 427 449 427 449 0.98 5 23 0.00067 0.065 14.2 4.3 1 23 455 477 455 477 0.96 6 23 0.0023 0.22 12.5 2.1 1 23 483 505 483 505 0.96 7 23 0.00086 0.083 13.8 1.4 1 23 511 533 511 533 0.98 8 23 0.00014 0.013 16.3 0.5 2 20 610 628 609 630 0.93 9 23 0.007 0.68 11.0 1.3 1 23 691 714 691 714 0.93 10 23 0.00041 0.039 14.9 0.9 1 23 747 769 747 769 0.98 11 23 1.9e-05 0.0018 19.0 1.6 1 23 775 798 775 798 0.97 12 23 4.8e-06 0.00046 20.9 0.4 1 23 804 826 804 826 0.98 13 23 4.7e-07 4.5e-05 24.1 0.6 1 23 832 854 832 854 0.98 14 23 6.9e-05 0.0066 17.3 0.5 1 23 860 882 860 882 0.98 15 23 2.8e-05 0.0027 18.5 1.0 1 23 888 910 888 910 0.96 16 23 7.5e-06 0.00072 20.3 0.9 2 23 917 939 916 939 0.96 17 23 3.7e-05 0.0036 18.1 2.3 1 23 985 1007 985 1007 0.99 18 23 8.7e-06 0.00084 20.1 3.0 1 23 1013 1036 1013 1036 0.96 19 23 0.065 6.2 7.9 0.2 1 23 1042 1064 1042 1064 0.98 20 23 8e-05 0.0078 17.1 4.1 1 23 1070 1092 1070 1092 0.95 21 23 4.8e-06 0.00046 20.9 2.0 1 23 1098 1120 1098 1120 0.97 22 23 0.00064 0.062 14.2 5.7 1 23 1126 1148 1126 1148 0.98 23 23 0.00036 0.035 15.0 1.3 1 23 1154 1177 1154 1177 0.96
Sequence Information
- Coding Sequence
- ATGGAGACAGGAGAACCTGCAATGTTTAGACTATCCGAGAAAACACTGTCACACGGGACATCGAACTACAACATTCAGGACGAAGAtgcagaacaaaaaaattcagagaGCACGGATATATCCATGGAGAATCGTGAATGTACGGAGTCAAAAGAGAGGAGCTCTGGCTGGTCCGAGATCTGTAGAGTATGCGCCAATAAAAATAGTCATGTTGTACCGATATTCGAAGGCGAAGGAGCCGAACACGACTTGTGCAAGAAAATTCACAAATACCTTCCAATTcagGTATCAAAAGACGACACTTTGCCCGTACAGCTGTGCTACCAATGTGCAGCGACGATACTGGCATGGCACGAGCTACTCGAAGGATGCATGGAAGCTGAGAAAAGACTCATGCAGATGGAATCGGAGCTCAACGACAAGGAACAGATGCAACTGAAGTATACAGAAATTCTCAGTTCTAATGGACATGCTGGAGTAATTATTGCAAACGAAGAGCTTGTCGACGATCCAGAGCCAATTGTAACTCATGTAGAGGAACAGATATGCTCAACGGAAAAATTGCGAGAGTCAAGCGAGATCGTCGAGCGTGCTCCTAGTCAGGAACGCGAAGAGAGGTCCGGCAAATCGAAGAAGCCATTTAAGCTATTCCTTGACACGCAAAGTATATGTCGGAAACCGAGAAGAAaagttaagatcgaagttaGAGACGGGAAGCGTGCGACGAGAGACAGTTCGGACGCAATATGGAGGGACGTTTTGTACACGAGCATCGAGCATCAGTTGCCGAGCTTGGAGTCGTCGGAGCATGCGAACGAGGATCTGAACTGCTGCGTCGATGAAGCATCCACAAAAGCCGAAGAAACTGAGTTCGCCTCGTCGTTAAAAATCGAGAACACCGAGAGAGAAACATTAGCCTTGTGCGAGGAAGATATCGTGAGGCATTCGGAATATCCGGTGTATGGGTCAACGCCCGCTGATGAGTCGAGTCCCGAGGACAGAGACGGCAGAGCAAAATGTAACGTGTGCTCTCGCGAATTTTCTCAAATAAACGATCTTCACGTTCACGCCAAAGAACACAAAGATTTGCATGAATCGCGAAAAATCTATCAGTGCGTCGAGTGCGCCAAGAGTTTTCGTCTCAAGGACTCTTTCGTTCGTCACCTGCGAATTCATCGCGACGAGCGACCGTTCACTTGTCACGTTTGCGGCAAACAATTCCGCGACTCCGGCGGTCTCTCGAGGCATCTGAAAGACGTTCACGCGAAGTTGAAGAACTTCCCTTGCGACATATGCGGGAAGAGTTTCTCGTCGAAGGCAACGCGCGACGATCATCGACGAACCCACACAGGCGAGAGACCTTACGTTTGCGATACTTGCAACAAATCATTCAAATCCAAAGCTTGCCTGTACAGTCACAACAAGCTTCATACAAACGAGTTTCCACATCCGTGCGCATACTGCAGTAAGAAATTTCGTCGAAGGCAGGAGATGCTCGTACACGCGACTACTCACACCGGCGAGAAGAATTACAGTTGCGACGTTTGCTACAAGCGCTTTCGCGTTAAGACCGAAGTTGTCAGGCACAAATTGACTCATTCCGACGAGAAACCCTTCGTCTGCGCCAAATCCGGTGCTGCGAGAAGATTCGAAACTTTCGTCAGAAAACGGAGAGAAGAGTCCGGGGGAAATGGCACACTGAAACTCGCCATCGTGCCAAGATCGAGCCGTAGAAGGCAGGCAAACTCCACTGTTCCAACAAAAAACACAGGAGCCAAGCCCGCTTGTACGAAGGATCCCAAAGAGGTCATCGAACAGAAAAATACCTCGTGCGACAGGTGTTCGAGGATGTTCAAGAGGGAATCAAATTTGAAACGGCATGTGGCGAACTGCCGTGAGAAACCAGGAAAGGATAAGACTGTCGCCACGGAATGCGAACCGATAGAGAAAGAGGCCCCAGTCTTCGAGAAGGAAAACTTCGATGCGGGAGCTTCGGAAGAATCGACGAACCGGACTAAGTCCGACTCGTGGGACGTGGGAGAATCGTCGATCAAGAAAAGACTGCCTACCTATCCGTGCCTGTACTGCGACTTCAcaacgagaaagaaaaaattgttgaaagttCACACGAGCGAGGATCACTCGGAGATCGTGAAAGCGAAACGCGGTCGGAAACAGCGCAGCGTGGACAGGGATCTCGTCAATCGTTCGAGGATGGAAGCGAACGGTCGTGTATACTATCACTGCAACGACTGCGGAAAAAATCTCTTCTCCCCTTACACCTTCGCCTGGCACGTGAGAATCCACACGGGCGAGCGGCCGTTCACTTGTCACCTGTGCGGCAAACAGTTTCGCGTTAATCAGGGCCTGGCTCGTCATCTCCGGGAGACTCACgccggtataaaaaaattcccctGCGATCTTTGCGGCCGAATGTTCTCAACGAAGAGGAACGTCGAGGATCATCGGCGCATACACACAGGCGAGCGTCCGTTCGTTTGCAACGTTTGCGGCAAAGCCTTCAAGCAGAAAGCCTCGCTCTTCGTTCACAACCGAACTCACACGGATTTCTTCCCGTTCAAGTGCAGCTACTGCGATCAGGGCTTTCGCACGAGACCACCGCTCGTCGTCCACATGACGAAACACACCGGCGAGAAGCCTCACGCTTGCGACATCTGCGACCGAGCTTTTCGGATAAAGTACGAACTGAAGCGTCACCGTCTGATACACTTCGACGAGAAACCCTGGCAGTGCACCGACTGCGGTCTGTCCTTTCGACAGAAGCGATACCTGGTTAATCATAAGAGAATCAATCACGCCTGCGTCCCGAGAACCTCGGCGAGTACAATCGATGGAGCGAAGGATTCGAAGCCCTCGCCGCGAGCCAGACGAACGTCGGAGCATCGGGAGGAATTGATCCGGTCGAGGATCAACTGTAACGGCGTTCCGCGGTACAAGTGCCGGGACTGCGGAAAGATTCTCTCGACCTCGTACAACTTCCTGACCCATCGAAACAGGCACACCGGTGAAAAGCCCTTCACCTGCCACGTGTGCGGCAAGAGTTTCCGTCACGGCTCGGTCCTCAACAGGCATCTGCGCGACGTTCACGCGGGCAGCAAGAATTACCCGTGCGACCTCTGCGATCGTCGTCTAGCTTCCAAAATAGCTCGGGACGAGCATCGAAGAACTCACACGAACGAGAGACCGCACGTTTGCGAGACTTGCGGCAAGTCGTTCAGGCAGAAAGCGTCCCTCCACGTTCACAGGAGCTTTCACACGAACAGCTGCGACCACCGGTGCAAGATATGCGAGAGAGCTTTCAGGAGAAAGCAGGAACTCGAGAAACACCTGTTGATCCACACGGGGCAGAAACCGCACGAGTGCGAGATTTGCGAGAAACGCTTTCGTACGATGGGATGTCTGAGTCGTCACAAGAAGACTCACGACAGCGTGAAGCTTCACGTCTGCGAACGGTGCGGCGTGAAATTCAGCCAGGAGCGTTATCTGAAGAATCACGCTAGAAACGTGCACGGAACGATTAAAGATTTGCCTGCTTCTACACCGACTTGA
- Protein Sequence
- METGEPAMFRLSEKTLSHGTSNYNIQDEDAEQKNSESTDISMENRECTESKERSSGWSEICRVCANKNSHVVPIFEGEGAEHDLCKKIHKYLPIQVSKDDTLPVQLCYQCAATILAWHELLEGCMEAEKRLMQMESELNDKEQMQLKYTEILSSNGHAGVIIANEELVDDPEPIVTHVEEQICSTEKLRESSEIVERAPSQEREERSGKSKKPFKLFLDTQSICRKPRRKVKIEVRDGKRATRDSSDAIWRDVLYTSIEHQLPSLESSEHANEDLNCCVDEASTKAEETEFASSLKIENTERETLALCEEDIVRHSEYPVYGSTPADESSPEDRDGRAKCNVCSREFSQINDLHVHAKEHKDLHESRKIYQCVECAKSFRLKDSFVRHLRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFPCDICGKSFSSKATRDDHRRTHTGERPYVCDTCNKSFKSKACLYSHNKLHTNEFPHPCAYCSKKFRRRQEMLVHATTHTGEKNYSCDVCYKRFRVKTEVVRHKLTHSDEKPFVCAKSGAARRFETFVRKRREESGGNGTLKLAIVPRSSRRRQANSTVPTKNTGAKPACTKDPKEVIEQKNTSCDRCSRMFKRESNLKRHVANCREKPGKDKTVATECEPIEKEAPVFEKENFDAGASEESTNRTKSDSWDVGESSIKKRLPTYPCLYCDFTTRKKKLLKVHTSEDHSEIVKAKRGRKQRSVDRDLVNRSRMEANGRVYYHCNDCGKNLFSPYTFAWHVRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDLCGRMFSTKRNVEDHRRIHTGERPFVCNVCGKAFKQKASLFVHNRTHTDFFPFKCSYCDQGFRTRPPLVVHMTKHTGEKPHACDICDRAFRIKYELKRHRLIHFDEKPWQCTDCGLSFRQKRYLVNHKRINHACVPRTSASTIDGAKDSKPSPRARRTSEHREELIRSRINCNGVPRYKCRDCGKILSTSYNFLTHRNRHTGEKPFTCHVCGKSFRHGSVLNRHLRDVHAGSKNYPCDLCDRRLASKIARDEHRRTHTNERPHVCETCGKSFRQKASLHVHRSFHTNSCDHRCKICERAFRRKQELEKHLLIHTGQKPHECEICEKRFRTMGCLSRHKKTHDSVKLHVCERCGVKFSQERYLKNHARNVHGTIKDLPASTPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00058113; iTF_00058873; iTF_00059113;
- 90% Identity
- -
- 80% Identity
- -