Apro015150.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amblyjoppa proteus
Gene Symbol
ECU06_1150
Assembly
GCA_963922035.1
Location
OY998233.1:6471242-6475715[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0061 0.59 11.2 0.3 2 23 340 361 340 361 0.96
2 24 2.8e-05 0.0027 18.5 0.8 1 23 371 393 371 393 0.99
3 24 3e-06 0.00029 21.6 1.1 1 23 399 422 399 422 0.95
4 24 1.2e-05 0.0012 19.6 0.6 1 23 428 450 428 450 0.98
5 24 0.00069 0.066 14.1 4.3 1 23 456 478 456 478 0.96
6 24 0.0024 0.23 12.4 2.1 1 23 484 506 484 506 0.96
7 24 0.00088 0.084 13.8 1.4 1 23 512 534 512 534 0.98
8 24 7.2e-06 0.00069 20.4 1.6 1 23 540 563 540 563 0.98
9 24 2.6e-05 0.0025 18.6 0.5 2 20 631 649 631 651 0.94
10 24 0.0042 0.4 11.7 1.3 1 23 710 733 710 733 0.93
11 24 6.4e-05 0.0062 17.4 1.3 1 23 766 788 766 788 0.98
12 24 1.9e-05 0.0019 19.0 1.6 1 23 794 817 794 817 0.97
13 24 4.9e-06 0.00047 20.9 0.4 1 23 823 845 823 845 0.98
14 24 4.8e-07 4.6e-05 24.1 0.6 1 23 851 873 851 873 0.98
15 24 0.00025 0.024 15.5 0.5 1 23 879 901 879 901 0.98
16 24 2.3e-05 0.0022 18.8 1.6 1 23 907 929 907 929 0.97
17 24 7.2e-06 0.00069 20.4 0.9 2 23 936 958 935 958 0.96
18 24 1.6e-05 0.0016 19.2 1.9 1 23 1006 1028 1006 1028 0.99
19 24 3.4e-05 0.0033 18.2 2.0 1 23 1034 1057 1034 1057 0.96
20 24 0.059 5.6 8.1 0.4 1 23 1063 1085 1063 1085 0.98
21 24 0.00024 0.023 15.6 4.1 1 23 1091 1113 1091 1113 0.94
22 24 5.8e-06 0.00056 20.7 2.2 1 23 1119 1141 1119 1141 0.98
23 24 0.00025 0.024 15.5 5.0 1 23 1147 1169 1147 1169 0.98
24 24 0.0024 0.23 12.4 0.9 1 23 1175 1198 1175 1198 0.96

Sequence Information

Coding Sequence
ATGGAGATAGGAGAGCCTGCAACGTTTAAACTATCCGAGAAAACACTGTCACGTGGGACATCGAACTACAACATTCCGGACGATGATGCGGACCAAAAAAATGCAGAGAACACGGATATATCCATGGAGAATGGTGAATATACAGAGTCCAAGGAGAAGAGCTCTGGCTGGTCCAAAATCTGCAGAGTATGCGCCAATGAAAATGGTCATGTCGTTCCGATATTCGAAGGTGAAGGAGCCGAACATGACttgtgcaagaaaattcacaAATACCTTCCAATTCAGGTATCGAAAGACGATACCTTACCTGTACAGCTCTGCTACCAGTGCGCAGCAACGTTACTGGCGTGGCACGAGTTACTGGAAGGCTGCATGGAAGCTGAGAAAAAACTCGTGCGGATGGAATCTGAGCTCAAAGAGAAGGAACAGATGAAACTGAAGTATACAGAAATTGCCAGTTCTAACGGGCATGCAAGAATAATTATTGCGAACGAAGAGCTTGTCGACGATCCGGAGCCAATTGCAACTCATGGAGAGGAACTGACATGCTCAACGGAAAAATTGCGGGAGCCAAACGAGACCGTCGAACAAGCTCCTAGTCAGGAAAGCGAAGAGagGTCCGGCAAATCGAAGAAGCCATTTAAGCTATTCCTTGACACGCAAAGTATATGTCGGACGTCGAGAAGAAAAGTTAAAATCGAAGTTAGAGACGAGAAGCGTGCGACGAGAGAAAGTTCGGACGCAATATGGAGGGACGTTTTGTACACGAGCATCGAGAATCAGTTGCCGAGCCTGGAGTCGCCGGAGCATGCGAACGAGGATCTGGACTGCTGCGTCGATGAAGCATCCGCGAAAGCCGAAGAAACTGAGCTCACCTCGTCGTTAAAAATCGAGAACACGGAGAGAGAAACATTAGCATTGTGCGAGGAAGACATCGTGCGACAATCGGAATATCCGGTGTACGAAGAGTCGACGCCCGGCGATGAGTCGAGTCCCGAGGAAAGAGACGCCAGGGCAAAATGCAACGTGTGCTCTCGGGAATTTTCTCAAATAAATGATCTCTACGTTCACGCGAAGGAACACAAAGATTTGCCGGAATCGCGAAAGATCTATCAGTGCGTCGAGTGCGCCAAGAGTTTTCGTCTCAAGGACTCTTTCGTCCGTCACCTACGAATTCATCGCGACGAGCGACCGTTCACTTGTCACGTTTGCGGCAAACAATTTCGCGACTCCGGCGGTCTCTCGAGGCATCTCAAAGACGTTCACGCGAAGCTGAAGAACTTCCCTTGCGACATTTGCGGCAAGAGTTTCTCGTCGAAGGCAACGCGCGACGATCATCGACGAACCCACACGGGCGAGAGGCCTTACGTTTGCGATACTTGCAACAAATCATTCAAGTCCAAAGCTTGCCTGTACAGCCACAACAAGCTTCACACGAACGAGTTTCCGCATCCGTGCGCCTACTGCAGCAAGAAGTTCCGCCGAAGGCAGGAGATGCTCGTACACGCGACCACTCACACCGGCGAGAAGAATTACAGTTGCGACGTTTGCTACAAGCGCTTTCGCGTTAAGACCGAAGTTGTCAGACACAAATTGACTCATTCCGACGAGAAACCCTTCGTCTGCGCCAAGTGCGGTCTCAGATTTCGTCAGAATCGTTATCTCAACAACCACATTAAAACGCGACACGTTCAATCCGGTGCTGCGAGAAGATTCGAAACTTTCGTCCGAAAACGGAGAGAAGCTTCCAAGGGAAATGGCTCAGTGAAACTCGCCTCCGTGCCAAGATCGAGCCGTCGAACGCAGGTGAACTCCGTTCTTCCGACAAAAAACACGGGAGCCAAGCCAGCTTCTACGAGCGATCTTAAAAAGGTCGCTGAACAGAAAAATACCTGCGACAAGTGTTCGAGGGTCTTCAAGAGGGAATCAAATCTGAAACGGCACGTAGCGAACTGCCGCGAGAAACCGGCAAAGGATAAGAAGATCCTCTCCACGGAACGCGAACCGATCGAGAAAGAGGCCTTCGAGGAAAACTTGGATGCGGACGCTTCGGGCGAATCGACGAACCGGGATAAGTCCGACACGTGGGACGTGGGAGAATCGTCGATGAAGAAAAGACTGCCCATCTATCCGTGCGCGTACTGCGACTACacaacgagaaagaaaaaattgttgaaacttCACACGAGCGAGAATCACTCGGAGATCCCAAAGGCGAAACGCGGTCGGAAACAGCGCAGCGTGGACGAGGATCTCGTAAATCGTTCGAGGATGGAAGCGAACGGTCGTATATACTATCACTGCAACGACTGCGGAAAAAATCTCTTCTCCCCTTACACGTTCGCGTGGCACATGAGAATCCACACGGGCGAGCGGCCGTTCACTTGTCACCTGTGCGGCAAGCAGTTTCGAGTCAATCAGGGACTGGCTCGTCATCTCCGCGAGACTCACGCCGGTATAAAGAAATTCCCGTGCGATCTTTGCGGCCGAATGTTCTCGACGAAGAGGAACGTCGAGGATCATCGGCGCATTCACACGGGCGAGCGTCCGTTCGTCTGCAACGTGTGCGGCAAAGCCTTCAAGCAGAAAGCCTCGCTCTTCGTTCACAATCGAACTCACACAGATTTCTTCGCGTTCAAGTGCAGCTACTGCGAGCAGGGCTTTCGCACGAGGCCACCGCTCGTCGTGCACATGACGAAGCACACCGGCGAGAAGCCTCACTCTTGCGACATCTGCGACCGAGCTTTTCGCATAAAGTACGAACTGAAGCGCCATCGTCTGATACACTTCGACGAGAAACCCTGGCAATGCACCGACTGCGGTCTCTCCTTTCGACAGAAGCGATACCTGGTTAATCATAAGAGAGTTAATCACGCCTGCGTCCCGAGAACCTCGACCTTGGCGAGTACGATCGATCGAGCGACGGATCCAAAGCCCTCGCCGCGAGCCAAACGAACGTCGGAGCAACGTGAGGAATTGGTCCGGTCGAGGGTGAATTGCAACGGCGTTGACCGATACAAGTGTCAGGACTGCGGAAAGATTCTCTCGACCTCGTACAACTTCCTGAGCCATCGAAACAGGCACACAGGCGAGAAGCCCTTCACCTGCCACGTGTGCGGCAAGAGTTTTGGTCACGGCTCGGTCCTCAACAGGCATCTGCGCGACGTTCACGCGGGCAACAAGAACTTCCCGTGCGATCTCTGCGATCGTCGTCTAACTTCGAGAATTGCTCGGGACGAGCATCGGAGAACTCACACGAACGAGAGACCGCACGTTTGCGAGACTTGCGGCAAGTCGTTCAGACAGAGAGCATCTCTTCACGTTCACAAGAGTTTTCACACGAGCAGCTACGACCACAAGTGCAAGATATGCGAGAGAGCTTTTAAGAGAAGGCAGGAACTCGAGAAACACCTGTTGATCCACACGGGACAGAAACCGCACGAGTGCGAGATTTGCGAGAAACGCTTTCGCACGATAGGATGTCTGAGTCGTCACAAGAGGACTCACGAGAGCGCGAAGATTCACGTCTGCGAACGGTGCGGCGTGAAGTTTGGCCAGGAGCGTTATCTGAAGAATCACGCTAGAAACGTGCACGGAACGATTAAAGCCTCGCCCGCTCCTACACCGGCGTGA
Protein Sequence
MEIGEPATFKLSEKTLSRGTSNYNIPDDDADQKNAENTDISMENGEYTESKEKSSGWSKICRVCANENGHVVPIFEGEGAEHDLCKKIHKYLPIQVSKDDTLPVQLCYQCAATLLAWHELLEGCMEAEKKLVRMESELKEKEQMKLKYTEIASSNGHARIIIANEELVDDPEPIATHGEELTCSTEKLREPNETVEQAPSQESEERSGKSKKPFKLFLDTQSICRTSRRKVKIEVRDEKRATRESSDAIWRDVLYTSIENQLPSLESPEHANEDLDCCVDEASAKAEETELTSSLKIENTERETLALCEEDIVRQSEYPVYEESTPGDESSPEERDARAKCNVCSREFSQINDLYVHAKEHKDLPESRKIYQCVECAKSFRLKDSFVRHLRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFPCDICGKSFSSKATRDDHRRTHTGERPYVCDTCNKSFKSKACLYSHNKLHTNEFPHPCAYCSKKFRRRQEMLVHATTHTGEKNYSCDVCYKRFRVKTEVVRHKLTHSDEKPFVCAKCGLRFRQNRYLNNHIKTRHVQSGAARRFETFVRKRREASKGNGSVKLASVPRSSRRTQVNSVLPTKNTGAKPASTSDLKKVAEQKNTCDKCSRVFKRESNLKRHVANCREKPAKDKKILSTEREPIEKEAFEENLDADASGESTNRDKSDTWDVGESSMKKRLPIYPCAYCDYTTRKKKLLKLHTSENHSEIPKAKRGRKQRSVDEDLVNRSRMEANGRIYYHCNDCGKNLFSPYTFAWHMRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDLCGRMFSTKRNVEDHRRIHTGERPFVCNVCGKAFKQKASLFVHNRTHTDFFAFKCSYCEQGFRTRPPLVVHMTKHTGEKPHSCDICDRAFRIKYELKRHRLIHFDEKPWQCTDCGLSFRQKRYLVNHKRVNHACVPRTSTLASTIDRATDPKPSPRAKRTSEQREELVRSRVNCNGVDRYKCQDCGKILSTSYNFLSHRNRHTGEKPFTCHVCGKSFGHGSVLNRHLRDVHAGNKNFPCDLCDRRLTSRIARDEHRRTHTNERPHVCETCGKSFRQRASLHVHKSFHTSSYDHKCKICERAFKRRQELEKHLLIHTGQKPHECEICEKRFRTIGCLSRHKRTHESAKIHVCERCGVKFGQERYLKNHARNVHGTIKASPAPTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01364831;
90% Identity
iTF_00059113;
80% Identity
iTF_00059113;