Aoxy020210.1
Basic Information
- Insect
- Allophyes oxyacanthae
- Gene Symbol
- lrrfip2
- Assembly
- GCA_932294395.1
- Location
- CAKOAO010000333.1:650329-665649[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.011 2.7e+02 1.1 0.4 62 91 74 103 33 108 0.68 2 3 1.5e-78 3.6e-74 250.2 23.3 1 297 123 419 123 421 0.90 3 3 1 2.5e+04 -5.9 16.7 1 48 418 464 418 492 0.72
Sequence Information
- Coding Sequence
- ATGGGGCATCGCTCTGAAGTGGCCACGCCTGACAATAGTGATGAGGAGAGCGGTGATGCCTTCACTGATGGAGATTTTGGTGATTCCGATGACGAAACTATCATCGAACGCCATGATGAAGCTAAACCTTCACACATACCCATCAATGAAACTGTGAacgaaaatattcaaaaaaatacagcttCCAATGGCCACTCTAACGGTGATGGTGTAGAAGAGCAGCTTAGACTGAATGGTCGAATGAATAGTGAGGATCAATCAAGTGATGTGGAAAGCCAAAGCTTCGTATTATCGGATTTGCGCAGAGATTCTCACGGTGATCAGAATCCTTCAATAGTTGGCATTCTTGGCGATCAACAGAACCATGCAGAGCAGCGGTTAGCAGCGCGTCGAGCGGCGCGGGCTGAAGCGCGCGAGATACGCATGCGCGAGCTAGAGAGACAGCAGCGCGAACAGGAGGACCATGCAGACAAAGCATACGATATGTATGCGGGAAAGACGCCAGAGGCGGTCAGTCGCCGCGGTGGCACGCGGCTGGCGGCGCTCAGCCCGGCCGTGCACTCGCCACGGCGCAGCTCTGAAGACTCCGTCGACGACAGCTTCAGCATCAAGGACCTCAGGcACGAGCTGAAAGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAATGACAAGGCGGCGCTGGGGTATCAGCTGGAACTGCTCAAGGACCGGATAGAGGAGCTGCACGAAGAGTACGCGCAGCTGCAGCGCGAACACAGAGAGAAGTGCTCATCATTCGAGCGTTTAAAGCGCGAGCACGAGTCGGTGAGCCGCGAGTTGAGCGCGGCCCGCGACGCCGTACGAGCACGTGacgcggcggcgggcgcggcgggcTTCGCCTTCGTGGACGCGGCGGCGCTGGGCGCGCGGGGCGAGgggggcgaggcgggcgcgcgGGGGGAGGCGGGCGCCGCCGTGGGCGTGGTGCCGTCGCTGGCGCTCGTCAGCCACACCGCCGAGCAGCTGCTCAACGACGCCGGCGAGGGCACGCTCGATGTGCGGTTGCAAAAGCTGCTGAGCTCGAAGCAAGGGTTGGAGTCGGAGGTGCGCAAGCTGAAGCTCCAGCTGAACGAGGAGCGCGCCGCCAGACAGAATGGCGTCACCAACCATCACGAACTAGAGTACGAGAATGAGCTGGAAACAGTTCGCAAGTCGGTCTCTGAGGCGAAGGCACGTGCGGCTCGTGCGGAGGCCGAGGCGGCGCTGCAGGCCGCGCACGTGGCGCGCCTCGAGGCGCAGCTGGCGCGTCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGAGAGAGGCTCGAGAGGCGCTCAACCGGGTCGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAGCGACTAGACAAGCTCAAGAACGCCAAATCCGCACTTCTAAAAGACCTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGDAFTDGDFGDSDDETIIERHDEAKPSHIPINETVNENIQKNTASNGHSNGDGVEEQLRLNGRMNSEDQSSDVESQSFVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEAVSRRGGTRLAALSPAVHSPRRSSEDSVDDSFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVRARDAAAGAAGFAFVDAAALGARGEGGEAGARGEAGAAVGVVPSLALVSHTAEQLLNDAGEGTLDVRLQKLLSSKQGLESEVRKLKLQLNEERAARQNGVTNHHELEYENELETVRKSVSEAKARAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_01538768;
- 80% Identity
- -