Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963565655.1
Location
OY751412.1:548500-564456[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-18 8.1e-15 54.4 0.1 1 45 476 521 476 521 0.96
2 2 1.4e-18 2.5e-15 56.0 0.0 1 43 891 934 891 936 0.94

Sequence Information

Coding Sequence
atggcGGATTGCCCCTATGCTCGCTGCATACAGGAACGCAGACACATCAGGAGGGAATTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTTGGTCTGGAACGTGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAAGCCAGCCGCATCACCGGCTTCATCCGGCCCTATCGACTGCATGCAGCAATCAGGCTGCTGGGAATGTCAGCCAGATTGGGTCACAGTATCATCGTCAGGCATCAACGGGCACAGTGCAGCCATCAACAACTCCACCGATATCGGCGACAGTAATAACAACGAGTGGAGAGCAACTGAAAGAACTGACAAATCACAAGGAGAACAACGATATAACTTGTCGTATAAGGCCCGAGGATATAAAATTGGAGATAGAAGCTGCACAGGAAGTAAATACTGGTGGACGCTCAGAGTTACAGCAGCTGGCAGAGGTAAATCCTTTGACAAGGATACAGAATATAAAAAACGAGAACggggaagaagaagaagagttCAACGAGAAAAACAACGTAAACGATACACTAGAGAGTGGAGAAAAGAGGCTAAAATTGGACGATTCATTGAGGACCTCGGTCAGCCCACTGAGGGAAAACCAACGGTCTCCCTCGAGACATTCGCGGGCGAACGAGGGGACCGATACAGCAGGGACCAACGATCAGAGTACAGAGAACGTGTTGGAACGGATACAGGTGACAGCGGGTCTATTGAGGGTaaagaaagaggaggaatTGCAGGAGCTACCGCAACAGGTGAACTGTGGAGGCAGCGATACTACGAGAATAGACACAGAGATCAACAGGCAAATAACGAAGGAACAATCAGAGACTACAAACGATTGCACATTAACGTATCCTGTCAATCGGCGAGTGAGTCCACCGCCGGAGGACTGGAAGCCATTGGACAAGTGCTACTTTTGTCTCGATGGAAAACTGCCCCACGACGATCAAGCGCCACTTAGTCCACAAAGTGAGAGTAGCAGTAGTTCCCGATCAGCAGAGTCTCCAATGTCAGTACAAGTGGATCCAATGGCGGCTtctgctgttgttgctgccGCCCTTAGTGGCACATATCCAACATTACTGCCGCAGTGGGTTTTACCACCAAGGGAAGCACCTCTTGTTGGCATCCAAAGCCATCAGGATACCGGTCAGTCTGCTGATCAGCCGCTCGATCTCTCAGCAAAACCTAAAAATTCTCAGGACAACAATATATCCATGGAACAACAAAAGATATCTTTGAGAATGCCAGGGAATATCGATCCGAAGGCTATCTTTACAACATCGTACCGGCCGAAGCCCCGATTACCCGGTCAAACTGGAGCCGGTGGTGTACCGGTGGTTGGTGGTGGCAGAAGGACCTACACAGAGGAAGAACTTCAAGCAGCTCTCAGGGACATACAGAGTGGCAAACTCGGTACAAGACGTGCAGCAGTAATCTACGGAATACCTCGGAGCACCCTGCGCAACAAGGTCTACAAGCTTGCAATGGAACGCGAGAGGGACGCCTCCCTCACTAGCACCCACACACATCCTCACGAGTCTGGGGTACCAGTACCAACCACCACCATCACCTCCACAATACCAACATCAACTACAACAGCATCAACACCAAATACGACCCAAAATGCCTCTGCAACAAGTCCGTCCCCGCAAGTGGATGAGTTTGATACTTGGTCACTTGGCGTGCGCGAGATTGCGAGCAATGAGGCAGATGATAAAGAACTGTCGGGCGCTGAAGAGGAGAAGGAAGTGGAGAAGGCACTTTTGAAACCGCTGTTATCGTTAGAAGACCTTGTGAGATTTTCAGCCCTCGAGGGCGGCGGTGGTGATTCCCTCCGGAATCTTCTTCAACGTGGACATGAAACGGGTACAGAATGGCCAGGTTTTGAGCACGCCAATATTGGACCCTACATACAGAAAATGTTGGCAGCAGCTGCACCATTTAAAGgtCTCGAGACACAGGAGTACAGGATACCGGAGGTAATGAGACGTTTGATGAGCGAGGACAAGAGGCTGAACAAAGACGTAAACGGTGATCAGTCGCACGGACAGTCGCCTCAGTCTCTCCAAAGTAGCCAACAACAGAGGTTACCAATGACAAACGATGATTTTAATCCAGCAATTGAGGAGGAGGCGAGCGACAGTGCTCAGGGTAGAGCAATACTCAAAATTCCGTCCTATAAACCAGCAAGTACACCTGGCTCGAGTAAAAACAATGGTGAGCCGAATTCAGCTGCATTTGCCCAGGGTTTTGCAGCATCATCCAGTGCAGCAGGTAGTCCTGGTCTTCTGGAGCGTGTCAGTCCAGCATTTTCTGGCACAAGTAGTCCAACTAATCCACTAGTTGGTAAAGGTGTTAGTGTTAATTTTCGTGATGTTATTGCAAAGAGTATTAgttcaaaatttcaagaggGCCAATCGGGCCAAACCAATCAAGAACCATCTATGCTCAGTGATAATCCATTTAAACGTGGAAGATATACACCACCGCAGAGTGGACAGCAGCAGCAATCACAGCAGCAAAAATCACAGAGCCATGAGAACAAATCAAAACAGAGTGCTGGTGGTAAAGGTACAAGGCCGAAACGTGGAAAATACAGAAATTACGATCGTGATAGTCTCGTTGAAGCTGTTAGAGCTGTGCAGAGAGGAGAAATGAGTGTTCATAGAGCTGGTAGTTACTACGGTGTTCCACATTCCACCCTCGAGTACAAGGTCAAAGAGAGGCATCTCATGAGGCCACGAAAGAGGGACCAGAAGCAGTCGGAGGACAAGGCAAAAGAGTCGACCACGACACCATCAACCCTGCGACCAGCTCATCAAGACAAGAAGCCGCCATTGAAACCTCAGAAGCCATTTACACCAGGTCCAGGTGGCATGCCAGGTGGTCCAAATGGATTGAAAATGCCATTCTTAGAAGGCATGCCACATCTCCCCTTCCCGCATCCATTCAACTTTGGCTGGGGTCCAGGGCCCTTCATGCCCTCACCATTCATCCCGGGCAGTCCAAACGTACCGACGATACTGCCTGAGCAATACTTTGCTACTCAGAGGATGCGAGGACTGCAGGAGCAACAGAGAAGTGCTGCCATTGTCCAGCAGAATCAGCAGCAGTCACAGCCGCAACAGCAGCAGAGTAACAGAGATGGTGGTGAAGCAGGTATGTCAAATTCACGTTCAATGGTTAAAACAACGAGGGACATGGCAGAGAGTCTTTATGAGGGTACAGGTGCCAATGGTAGCtttctcgataatttaatAAGATCAAGTTTGGAAACTGGTATACCACGGGAACAACGTGGTATAACAGAGGGACGAGGTCAGGCACAGTCGCATCCTGAAACAATGAGCAGTAAAGCATTAATTGATCAACTGTGCAGGAACTCAAGACGTACACCATTACCAAGAATGACAGATAGCAGTGAAGATGAGAGTTATCGTCCATCACGATCAGTACCAGAGAGACCAGAGAGAGTACCAACTGTTGATTTGAGTCCGTCACCAACTGAACGTGTTAAAAATGATGAGCACAGTAGCGATCGTCTTACATCACCACCAACGCCAATGTCAATAAGTAGAACTGGTAGTCGTGATGATGACACGAGGGACTCACGCATTGATATTGGCAGCAGAGAACGTGATGTGCACAATGGTGGTGATGAATTACGTAATAAGACAATGATGCAGCAACAGCTTAATCATTACTCGGATATGCAGAATATCTAtactgagaaaaaaagtgcCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAAAATCAGCAACCACAGCAGAAGGAATTTGGTGCTGTTAGTGGACTAGTTGTCCAACTACAGAGAGGCTACAATGCAGCTAGTAATTCGAGATCATCTGAACAAAATCAGCAGAATAATTCGCAGTCAGTAGCACAGACTGTTCAGGAGCCACAGGGACCTGCCCTCACCATGGAAGACTCCGTAGAGCAGTAG
Protein Sequence
MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSSTRSESASQPHHRLHPALSTACSNQAAGNVSQIGSQYHRQASTGTVQPSTTPPISATVITTSGEQLKELTNHKENNDITCRIRPEDIKLEIEAAQEVNTGGRSELQQLAEVNPLTRIQNIKNENGEEEEEFNEKNNVNDTLESGEKRLKLDDSLRTSVSPLRENQRSPSRHSRANEGTDTAGTNDQSTENVLERIQVTAGLLRVKKEEELQELPQQVNCGGSDTTRIDTEINRQITKEQSETTNDCTLTYPVNRRVSPPPEDWKPLDKCYFCLDGKLPHDDQAPLSPQSESSSSSRSAESPMSVQVDPMAASAVVAAALSGTYPTLLPQWVLPPREAPLVGIQSHQDTGQSADQPLDLSAKPKNSQDNNISMEQQKISLRMPGNIDPKAIFTTSYRPKPRLPGQTGAGGVPVVGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHTHPHESGVPVPTTTITSTIPTSTTTASTPNTTQNASATSPSPQVDEFDTWSLGVREIASNEADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGGGGDSLRNLLQRGHETGTEWPGFEHANIGPYIQKMLAAAAPFKGLETQEYRIPEVMRRLMSEDKRLNKDVNGDQSHGQSPQSLQSSQQQRLPMTNDDFNPAIEEEASDSAQGRAILKIPSYKPASTPGSSKNNGEPNSAAFAQGFAASSSAAGSPGLLERVSPAFSGTSSPTNPLVGKGVSVNFRDVIAKSISSKFQEGQSGQTNQEPSMLSDNPFKRGRYTPPQSGQQQQSQQQKSQSHENKSKQSAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSEDKAKESTTTPSTLRPAHQDKKPPLKPQKPFTPGPGGMPGGPNGLKMPFLEGMPHLPFPHPFNFGWGPGPFMPSPFIPGSPNVPTILPEQYFATQRMRGLQEQQRSAAIVQQNQQQSQPQQQQSNRDGGEAGMSNSRSMVKTTRDMAESLYEGTGANGSFLDNLIRSSLETGIPREQRGITEGRGQAQSHPETMSSKALIDQLCRNSRRTPLPRMTDSSEDESYRPSRSVPERPERVPTVDLSPSPTERVKNDEHSSDRLTSPPTPMSISRTGSRDDDTRDSRIDIGSRERDVHNGGDELRNKTMMQQQLNHYSDMQNIYTEKKSACDSKLIVDHSSQKNQQPQQKEFGAVSGLVVQLQRGYNAASNSRSSEQNQQNNSQSVAQTVQEPQGPALTMEDSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2