Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_017141405.1
Location
JADHZF010000004.1:924491-939602[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-17 1.2e-14 54.5 0.1 1 45 431 476 431 476 0.96
2 2 6.4e-18 3.6e-15 56.1 0.0 1 43 837 880 837 882 0.95

Sequence Information

Coding Sequence
ATGTCGTGGGGTTGGGGTGGTGTTGCAGGTCTGGAACGTGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAAGCCAGGCCCATCATCGGCTCTACCCGGCCCTCTCTACAGCCTGCAGCAATCTCGCTGCTGGGAATGCCAGCCAGATTGGCCAGCATCGCCAGCCATCAACGACACCGCCGCTGTCAGCGACAGTAATAACAACTGGTCAGGAGGGGCTGCTCAAGCAGAAAGAATTGGCCAATCATCGGCTCAACGAGGAGGCCTGTCGCATAAAGGCCGAGGATATAAAGCTAGAGGAGGCTGCACAGGAAGTCCAGAGCCTAGCGAGGATAAAAGTGGGAAACGAAAACGGCGAAGACCAGGAGCTGAACGACAAGAGCAACCACGAGGAAGAAGAGAGTGCGGAGAAGAGGCTGAAGTTGGACGAGTCGTTGAGGAGATCGGTGAGCCCATTGAGGGACAGCCAGGGAGAGCCCTTGAAAGATTCGCGGGCGAACGAGGGCACCGATCCGAAAGGGACCAAGGAGCCGAGTGCGGAAAGTGCATTGGACCGGATACAGGTGACGCCGGGTCTATTGAGGGTAAAGAAGGAGGAGGAGTTGCAGGAATTACCGCAACAGGTACCGAACTGTGGAGGTGGCGATACAGTGAGAGTAGATACCGAGGTCACAAGGCCAATAGCCAAGGAACAATCGGAGTTAATCAACGATTGTACGTTAACGTATTCTGTCAATCGGCGAGTGAGCCCACCGCCGGAGGACTGGAAGCCATTGGACAAGTGTTACCTCTGTCTCGATGGAAAACTGCCCCACGACGATCAAGCGCCACTTAGCCCACAAAGTGAGAGTAGTAGTAGTTCACGATCGGCCGAGTCTCCAATGTCGGTGCAAGTCGATCCAATGGCGGCTTCTGCAGTGGTCGCTGCCGCCCTTAGTGGTGCCTACCCCACCCTATTGCCACAATGGGGACTACCACCGAGGGATGCACCCCTTGTTGGTATTCAAACACATCATGATACTGGCCAATCGGCTGATCAGCCCCTTGATCTCTCGGCGAAACCGAAAAACTCTCAGGATAACAACATATCTATGTTGGAGCAACAGAAAATACCTCTGAGAATGCCGGCAAATATTGATCCCAAGGCTATATTTACATCGTCCTATCGTCAGAAGCCCCGACTTGCTGGACAAACCGGCGTCACTGGTGTACCAGTTGTTGGTGGTGGCCGAAGAACTTACACCGAGGAAGAGCTTCAGGCTGCCCTGCGTGACATCCAAAGTGGCAAACTTGGTACACGAAGAGCAGCTGTCATCTATGGAATACCAAGGAGCACACTTCGTAATAAGGTCTACAAGCTTGCAATGGAGCGCGAGAGGGACGCATCCCTCACTAGCACCCACTCACATCCTCACGAGTCTGGCGTACCAGTATCAACCACCACCATCACCTCCACAATACCAACATCAACAACAACAGCATCAACACCAAATACGACCCAAAATGCATCTGCAACAAGTCCGCCCCCGCAAGTGGATGAGGCGGATGATAAGGAGCTGTCGGGCGCTGAGGAAGAGAAAGAAGTGGAGAAGGCACTGTTAAAACCACTGCTATCACTCGAGGACTTGGTGAGATTTTCAGCATTGGAGGGTAGCGGACGTGATTCACTCAGGACATTACTCCAGCGTGGACACGAAACTGGCACTGAGTGGCCTGGATTTGAGCATGCCAATATTGGGCCCTATATTCACAAAATGTTGGCCGCAGCGGGTCCCTTTAAAGGTCTTGATAATCAAGAGTACAGGATACCCGAAGTGATGAGGCGGCTGATGAGCGAGGACAAAAGACTCAATAAGGATGTGAATGGTGATCAATCGCATTTACACTTACAATCACAATCGCAAGGTTTACAAGGTACACAACAGCAGAGGTTACCAATGACAAATGATGATTTTAATCCAGCTATTGAAGATGAAGCTAGTGACAGCGCTCAGGGTAGAGCTATACTGAAAATTCCGTCCTATAAACCAGCGAGTACACCAGGCTCAAGTAAAAATAACGGTGAGCCAAATTCAGCGGCATTTGCCCAGGGCTTTGCTGCATCATCAAGTGCAGCTGGTAGCCCAGGCTTATTGGAGCGTGCTAGTCCAGCATTTTCTGGCACAAGTAGTCCAACAAATTCCCTAGTTGGCAAAGGTGTCAGTGTTAATTTTCGTGATGTCATTGCTAAAAGTATCAGTTCAAAATTTCAAGAGGGCCAAACTTGTCATAATATTAATCAAACAGCTACAGCACTGCTCAGTGATACAAATCCATTTAAACGTGGCAGATATACGCCGCCACAAAGTGCCCATCAGCAACAATTGCAGCAGCAAAAATCACAGAGCCAAGAGAACAAATCAAAACCGGGCGCTGGTGGTAAAGGTACAAGACCAAAACGTGGAAAGTATAGGAATTATGATCGTGATAGTCTTGTTGAGGCTGTTAGGGCTGTGCAGAGAGGTGAAATGAGTGTTCATAGAGCTGGTAGTTACTACGGTGTGCCACATTCCACTCTTGAGTACAAGGTCAAGGAGAGACATCTCATGAGACCACGAAAGAGGGACCAGAAGCAGTCGGACGACAAGTCAAAGGAGTCTCCAACGACGCCATCATCACTGCGTCCGGCTCACCAAGACAAGAAGCCACCGCTAAAGCCTCAAAAATCCTTTACACCTGGTGCTGGTGGTTTGCCAGGTGGTCCAAATGGTTTAAAAATGCCCTTCTTAGACGGCATGCCCCACTTACCATTTCCACATCCCTTCAACTTTGGTTGGAGTCCCACATTCATGCCTTCACCATTCATTCCTGGTGCACCTAATGTACCAACGATACTGCCCGAGCAATACTTCGCTACGCAACGAATGCGTGGTCTCCAAGAGCAACAACGTAGTGCCATCGTTCAACAGCAGCAGCAGAGCAATAGAGAGGGTAGTACAGAGCCAGGTACATCCAATTCCCGTACAATGGCCAAAGCAACGAGAGAAATGGCGGAGAGCCTCTACGAGGGTACCGGTGCTAATGGTAGCTTTCTTGACAATTTAATAAGATCAAGCCTGGAGACTGGTATGCCACGCGAGCAGCGCGGCATTGGCGAGGGCCGGGGCCAGCATCATTCCGAAGCAATGAGTAGTAAAGCATTGATTGATCAATTGTGCCGGAGTACCAAGCGTACACCATTGCCACGCATGACAGACAGCAGTGAGGATGAAAGCTATAGACCATCACGATCATTACCTGATAGACCGGAGCGTATACCAACCGTTGATCTTAGCCCATCGCCAACTGATCGTCTTAGAAATGATGATCAGGGCAGTGAGCGTTTAACATCACCACCAACACCATTGTCAATAAGTAGGACTGGTAGTCGTGATGATGATACTAGGGATTCACGAATTGATCGTGGTAGTAGAGAGCGCGATGTGCACAATGGTGGTGATGATGGACGTAAAACAATGCAACAACAGTTGAATCATTACCCGGATATACACAATCTTTATGCCGTAACAAATGAGAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAGCAGCAGCAGCAGCAACAGCAGGGAAAGGAGTTTGGTGCTGTTAGTGGTCTTGTTGTGCAACTTCAGAGAGGTTATAATTCTGGAAGTAATTCAAGAACAACAGAAACAGAACAGAATCATTCACAGCCAGTACAGAATGTTCAGGAGCAACGTGGACCTGCCCTCACCATGGATGACACCGTTGAGCAGTAG
Protein Sequence
MSWGWGGVAGLERVAEELMGRRRWKQYQDTLYSSTRSESASQAHHRLYPALSTACSNLAAGNASQIGQHRQPSTTPPLSATVITTGQEGLLKQKELANHRLNEEACRIKAEDIKLEEAAQEVQSLARIKVGNENGEDQELNDKSNHEEEESAEKRLKLDESLRRSVSPLRDSQGEPLKDSRANEGTDPKGTKEPSAESALDRIQVTPGLLRVKKEEELQELPQQVPNCGGGDTVRVDTEVTRPIAKEQSELINDCTLTYSVNRRVSPPPEDWKPLDKCYLCLDGKLPHDDQAPLSPQSESSSSSRSAESPMSVQVDPMAASAVVAAALSGAYPTLLPQWGLPPRDAPLVGIQTHHDTGQSADQPLDLSAKPKNSQDNNISMLEQQKIPLRMPANIDPKAIFTSSYRQKPRLAGQTGVTGVPVVGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHESGVPVSTTTITSTIPTSTTTASTPNTTQNASATSPPPQVDEADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGRDSLRTLLQRGHETGTEWPGFEHANIGPYIHKMLAAAGPFKGLDNQEYRIPEVMRRLMSEDKRLNKDVNGDQSHLHLQSQSQGLQGTQQQRLPMTNDDFNPAIEDEASDSAQGRAILKIPSYKPASTPGSSKNNGEPNSAAFAQGFAASSSAAGSPGLLERASPAFSGTSSPTNSLVGKGVSVNFRDVIAKSISSKFQEGQTCHNINQTATALLSDTNPFKRGRYTPPQSAHQQQLQQQKSQSQENKSKPGAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKSKESPTTPSSLRPAHQDKKPPLKPQKSFTPGAGGLPGGPNGLKMPFLDGMPHLPFPHPFNFGWSPTFMPSPFIPGAPNVPTILPEQYFATQRMRGLQEQQRSAIVQQQQQSNREGSTEPGTSNSRTMAKATREMAESLYEGTGANGSFLDNLIRSSLETGMPREQRGIGEGRGQHHSEAMSSKALIDQLCRSTKRTPLPRMTDSSEDESYRPSRSLPDRPERIPTVDLSPSPTDRLRNDDQGSERLTSPPTPLSISRTGSRDDDTRDSRIDRGSRERDVHNGGDDGRKTMQQQLNHYPDIHNLYAVTNEKKSACDSKLIVDHSSQKTQQQQQQQQQGKEFGAVSGLVVQLQRGYNSGSNSRTTETEQNHSQPVQNVQEQRGPALTMDDTVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00047881;
90% Identity
-
80% Identity
-