Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_030522845.1
Location
JAPYZM010001728.1:1-13141[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-18 1.3e-14 54.7 0.1 1 45 238 283 238 283 0.96
2 2 1.7e-18 4e-15 56.3 0.0 1 43 661 704 661 706 0.95

Sequence Information

Coding Sequence
GAACCGAGTGCGGAAAACGCGTTGGACCGGATACAGGTGACGCCGGGTCTATTGAGGGTAAAGAAGGAGGAGGAGTTGCAGGAGTTACCGCAACAGGTGAACTGTGGAGGCGGCGATACTACGAGAGTAGATACCGAGGTCAACAGGCCAATAACCAAGGAACAATCGGAGTCTATCAACGATTGTACGTTAACGTATCCTGTCAACCGGCGAGTAAGTCCACCGCCGGAGGACTGGAAACCATTAGACAAGTGTTATCTCTGTCTCGATGGAAAACTGCCCCACGACGATCAAGCGCCACTTAGCCCACAAAGTGAGAGTAGTAGTAGTTCACGATCTGCAGAGTCTCCAATGTCGGTGCAAGTCGATCCAATGGCGGCTTCTGCCGTGGTTGCTGCCGCCCTTAGTGGCGCGTACCCCACGTTACTGCCACAATGGGGGTTACCACCGAGGGATACATCCCTCGTTGGTATTCAGACACACCATGATACTGGCCAATCGGCGGATCAGCCCCTTGATCTCTCGGCGAAACCGAAAAACTCTCAGGACAACAACATATCCATGTTGGATCAACAAAAAATACCTCTGAGAATGCCGGCGAATATTGATCCCAAGACTATCTTCACAGCGTCGTACCGGCAGAAGCCCAGACTACCCGGACAAACGGGAGTTGGTGGTGTACCAGTTGTCGGTGGTGGCAGAAGAACCTACACCGAGGAAGAACTACAAGCTGCCCTCAGGGACATACAGAGTGGTAAACTCGGTACACGAAGAGCAGCTGTCATCTACGGGATACCAAGAAGCACCCTCCGTAACAAGGTCTACAAGCTTGCAATGGAACGCGAGAGGGACGCCTCCCTCACTAGCACCCATTCACATCCTCACGAGTCTGGCGTACCAGTATCAACCACCACCATCACCTCCACAATACCAACATCAACAACAACAGCATCAACACCAAATACGACCCAAAATGCCTCTGCAACAAGTCCGCCCCCGCAAGTGGATGAGTTTGATACTTGGCCACTTGGCGAACGCGAGGTTGCAAGAAGTGAGGCGGATGACAAAGAGCTGTCTGGTGCTGAGGAGGAGAAGGAAGTGGAAAAAGCCCTGCTGAAGCCACTGCTATCTCTTGAAGACTTGGTGAGATTTTCAGCCCTCGAGGGTAGCGGTAGAGATTCTCTCAGAACACTCCTTCAACGAGGACACGAAACCGGTACAGAGTGGCCTGGTTTTGAGCATGCCAATATCGGACCCTATATCCACAAAATGTTGGCTGCTGCGGGGCCCTTCAAAGGTCTCGAGAATCAAGAGTACAGGATACCTGAGGTGATGAGGCGATTGATGAACGAGGACAAAAGACTAAACAAAGATGTGAATGGTGATCAGTCTCACTCACACGTACAATCACCCCAGTCGCAGTCGTTACAGGGTGGACAACAGCAGAGGTTACCAATGACAAATGATGATTTCAATCCAGCTATCGAGGAGGAGGCAAGCGACAGCGCTCAGGGTAGAGCTATACTCAAGATTCCGTCCTATAAACCAGCGAGTACACCTGGCTCAAGTAAGAACAATGGTGAGCCTAATTCAGCAGCATTTGCTCAGGGTTTTGCTACATCATCTAGTGCAGCTGGTAGCCCTGGTCTGTTGGAACGCGCTAGTCCAGCATTCTCGGGTACGAGTAGTCCGACGAATTCTCTCGTTGGTAAAGGTGTCAGTGTTAATTTCCGCGATGTTATTGCTAAGAGTATTAGCTCAAAATTTCAAGAGGGCCAGTCGGGGCAGACCAATGTCTCCCAAACACCTACGCCGTTGCTCAGTGATTCGAATCCCTTTAAACGGGGGAGGTATACACCACCTCAGACTGCACATCAGCAACAGTCGCAGCAGCAAAAATCGCAGAGCCAAGAGAACAAATCAAAACCAGGAGCTGGTGGCAAAGGTACTAGACCAAAACGTGGAAAATACAGGAATTATGATCGGGATAGTCTGGTCGAGGCGGTTAGGGCTGTGCAAAGAGGAGAAATGAGTGTTCATAGGGCTGGTAGTTACTATGGTGTGCCACATTCCACCCTCGAGTACAAGGTCAAAGAGAGGCATCTTATGAGACCGAGAAAGAGGGACCAAAAGCAGTCGGAGGACAAAACAAAAGACTCACCGACAACCCCATCATCACTACGGCCAGCTCACCAAGACAAAAAGCCACCGCTCAAGCCTCAGAAATCATTTACCCAAGGACCAGGTGGTCTCCCAGGCGGTCCAAACGGTCTGAAAATGCCATTTCTAGATGGAATGCCGCACCTACCATTTCCACATCCATTCAATTTTGGTTGGGGTCCAACGCCATTCATGCCTTCACCATTTATACCAGGTGCACCAAATGTACCAACGATACTGCCCGAACAGTATTTTGCAACCCAGAGAATGCGTGGACTTCAGGAGCAGCAGCGAAGTGCTATTGTacagcaacaacaacagcaacaacaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagagTAGTAGAGAAGGAGCTGGTACAGAGCCAGGTACGTCAAATTCACGTTCAATGGTTAAAACAACGAGGGAAATGGCTGAGAGTCTTTATGAGGGTACAGGTGCAAATGGTAGCTTTCTCGATAATTTAATAAGATCAAGTTTGGAGACTGGTATGTCAAGGGATCAACGGGGTATAACTGAAGGACGGGGTCAGGGACAACATCATTCCGAGGCTATGAGCAGTAAAGCATTAATTGATCAACTGTGCAGGAACTCAAGACGTACACCATTACCAAGAATGACAGATAGTAGTGAAGACGAGAGCTATCGTCCATCGAGATCATTGCCTGAGCGGCCAGAGAGAGTGCCAACTGTTGATCTAAGTCCATCGCCAACAGAAAGAATGAGAAATGACGATCAGGGAAGTGATCGTTTAACATCACCACCAACACCACTATCGATCAGCAGAGCTGGTAGTCGTGATGATGACACTAGGGATTCACGTATTGATGGTGGTAGTAGAGAACGTGAGGTACATAATGGTGGTGATGAGCCACGTAAAACAATACTACAACAGCAACAGCTGAATCACTACCCGGATATACACAATCTTTATGCCGTatcaaatgagaaaaaaagtgCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAACAGCAGCAACAACAGCAGAAGGAGTTTGGTGCTGTGAGCGGGCTGGTTGTGCAACTTCAAAGAGGCTACAATTCTGGGAGTAATGCGAGAATAACAGAGCAAGACCAGCAGAATAATTCAGCGTCAGTAGCACAGCCGGTTCAGGAACCACGGGGACCTGCCGTCAAGATGGAAGACTCCGTAGAGCAGTAG
Protein Sequence
EPSAENALDRIQVTPGLLRVKKEEELQELPQQVNCGGGDTTRVDTEVNRPITKEQSESINDCTLTYPVNRRVSPPPEDWKPLDKCYLCLDGKLPHDDQAPLSPQSESSSSSRSAESPMSVQVDPMAASAVVAAALSGAYPTLLPQWGLPPRDTSLVGIQTHHDTGQSADQPLDLSAKPKNSQDNNISMLDQQKIPLRMPANIDPKTIFTASYRQKPRLPGQTGVGGVPVVGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHESGVPVSTTTITSTIPTSTTTASTPNTTQNASATSPPPQVDEFDTWPLGEREVARSEADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGRDSLRTLLQRGHETGTEWPGFEHANIGPYIHKMLAAAGPFKGLENQEYRIPEVMRRLMNEDKRLNKDVNGDQSHSHVQSPQSQSLQGGQQQRLPMTNDDFNPAIEEEASDSAQGRAILKIPSYKPASTPGSSKNNGEPNSAAFAQGFATSSSAAGSPGLLERASPAFSGTSSPTNSLVGKGVSVNFRDVIAKSISSKFQEGQSGQTNVSQTPTPLLSDSNPFKRGRYTPPQTAHQQQSQQQKSQSQENKSKPGAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSEDKTKDSPTTPSSLRPAHQDKKPPLKPQKSFTQGPGGLPGGPNGLKMPFLDGMPHLPFPHPFNFGWGPTPFMPSPFIPGAPNVPTILPEQYFATQRMRGLQEQQRSAIVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSREGAGTEPGTSNSRSMVKTTREMAESLYEGTGANGSFLDNLIRSSLETGMSRDQRGITEGRGQGQHHSEAMSSKALIDQLCRNSRRTPLPRMTDSSEDESYRPSRSLPERPERVPTVDLSPSPTERMRNDDQGSDRLTSPPTPLSISRAGSRDDDTRDSRIDGGSREREVHNGGDEPRKTILQQQQLNHYPDIHNLYAVSNEKKSACDSKLIVDHSSQKTQQQQQQQKEFGAVSGLVVQLQRGYNSGSNARITEQDQQNNSASVAQPVQEPRGPAVKMEDSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00047881;
80% Identity
-