Fari002366.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_000806365.1
- Location
- NW:537394-608198[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 4.2e-15 54.4 0.1 1 45 481 526 481 526 0.96 2 2 1e-18 1.3e-15 56.0 0.0 1 43 889 932 889 934 0.94
Sequence Information
- Coding Sequence
- atggcGGATTGCCCCTATGCCCGCTGCATACAGGAACGCAGACACATCAGGAGGGAATTGCTGCGATGGACAAAGAATATGGTCTTCGTAGTTGGTCTGGAACGTGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAAGCCAGCCGCATCACCGGCTCTATCCGGCCCTATCGACAACCTGCAGCAATCTAGCTGCGGGGAATGCCAGCCAGATCGGGTCGCAACACCATCGTCAGGCATCAACGGGCACTGTACATCACCAATCATCAACACCACCGCTGTCAGCGACAGTAATAACAACGACTGGACAAGAGCATACGTCAATAAAGCAGAAAGAATTGACGAATCACAGGGGTGGCGAGGAGTCCTGTCGCATAAGGCCCGAGGATATAAAATTAGAGATAGAAGCTGCACAGGAGGTGAACAGTGGTGGACGCTCCGAGTTACTGCAGCACGGGGAGGTTCATACCTTGAGGATACAGGAGCGTACGAGACAAAGAGTAAACGAAAACGGGGAAGACGAAGATTTCAACGAGAACGAGAACGACTCGGAGTCCGCCGAGAAGAGGCTGAAGTTGGACGATTCATTGAGGACCTCGGTCAGCCCACTGAGGGAAAACGAACGGTCACCCTCCAGAGATTCGCGGGCGAACGAGGGAACCGAGCCGGAAGGGACCAAGGAACCGAGTGCGGAAAACGCGTTGGACCGGATACAGGTGACGCCGGGTCTATTGAGGGTAAAGAAGGAGGAGGAGTTACAGGAGTTACCGCAACAGGTGAACTGTGGAGGCGGCGATACTACGAGAGTAGATACCGAGGTCAACAGGCCAATAACCAAGGAACAATCGGAGTCTATCAACGATTGTACGTTAACGTATCCTGTCAACCGGCGAGTAAGTCCACCGCCGGAGGACTGGAAACCATTAGACAAGTGTTATCTCTGTCTCGATGGAAAACTGCCCCACGACGATCAAGCGCCACTTagccCACAAAGTGAGAGTAGTAGTAGTTCACGATCTGCAGAGTCTCCAATGTCGGTGCAAGTCGATCCAATGGCGGCTTCTGCAGTGGTTGCTGCCGCCCTTAGTGGCGCGTACCCCACATTACTGCCACAATGGGGATTACCACCAAGGGATGCACCCCTTGTTGGCATTCAGACACACCACGACACTGGCCAATCGGCGGATCAGCCCCTAGATCTCTCGGCTAAACCGAAAAACTCTCAGGACAACAACATATCCATGTTGGATCAACAAAAAATACCTCTGAGAATGCCGGCGAATATTGATCCCAAGACTATCTTCACAAGCTCATACCGGCAGAAGCCAAGACTGCCCGGACAAACAGGAGTTGGTGGTGTGCCGGTTGTCGGTGGTGGCAGAAGAACTTACACGGAGGAAGAATTACAAGCTGCCCTCAGGGACATACAGAGTGGTAAACTCGGTACACGAAGAGCAGCTGTCATCTACGGGATACCAAGGAGCACCCTCCGTAACAAGGTCTACAAGCTTGCAATGGAACGCGAGAGGGACGCCTCCCTCACTAGCACCCATTCACATCCTCACGAGTCTGGCGTACCAGTATCAACCACCACCATCACCTCCACAATACCAAcatcaacaacaacagcaTCAACACCAAATACGACCCAAAATGCCTCTGCAACAAGTCCGCCCCCGCAAGTGGATGAGGCGGATGATAAGGAGCTGTCAGGTGCTGAAGAGGAGAAGGAAGTGGAGAAGGCCCTGCTGAAGCCACTGCTGTCCCTCGAAGACTTGGTGAGATTTTCCGCCCTTGAGGGTAGCGGTCGGGACTCCCTCAGGACACTCCTCCAACGGGGACACGAAACCGGCACCGAGTGGCCTGGTTTTGAGCATGCTAATATTGGACCCTATATCCATAAAATGCTAGCCGCTGCTGGGCCATTCAAAGGTCTTGAGAACCAAGAGTACAGGATACCAGAAGTGATGAGGCGATTGATGAGCGAGGACAAAAGACTAAACAAAGATGTGAATGGCGATCAGTCGCACTCACACGTACAATCACCCCAGTCACAATCGTTACAAGGTGGACAACAGCAAAGGTTACCAATGACAAATGATGATTTCAATCCAGCAATAGAGGAGGAGGCGAGCGACAGCGCTCAGGGCAGAGCTATACTCAAGATTCCGTCCTATAAACCAGCGAGTACACCTGGCTCAAGTAAGAACAATGGTGAGCCAAATTCAGCAGCATTTGCCCAGGGTTTTGCTGCATCATCAAGTGCAGCTGGTAGCCCTGGCCTGTTGGAACGAGCTAGCCCAGCATTCTCGGGCACTAGTAGTCCAACGAATTCACTCGTTGGTAAAGGTGTCAGTGTTAATTTTCGTGATGTCATTGCTAAGAGTATTAgctcaaaatttcaagagggACAATCTGGACAGACTAATGTCACCCAAACACCTACACCATTGCTCAGTGATTCAAATCCATTCAAACGCGGTAGGTATACACCACCGCAGACTGCCCATCAGCAACAAACGCAGCAGCAAAAATCACAGAGCCAGGAGAACAAATCAAAACCGAGCGCTGGTGGCAAAGGTACGAGACCAAAACGTGGAAAATACAGGAATTATGATCGGGATAGTTTGGTAGAGGCGGTTAGGGCTGTGcagagaggagaaatgagTGTTCATAGGGCTGGTAGTTACTATGGTGTGCCACATTCCACCCTCGAGTACAAGGTCAAAGAGAGGCATCTCATGAGACCACGAAAGagGGACCAGAAACAGTCGGAGGACAAATCAAAAGACTCACCGACAGCGCCATCATCACTGAGACCAGCTCACCAAGACAAAAAGCCACCGTTGAAACCTCAAAAATCGTTTACACAAGGTCCAGGTGGTTTACCAGGTGGTCCAAATGGTTTGAAAATGCCGTTTTTAGACGGGATGCCGCATCTACCATTTCCACATCCATTCAATTTTGGTTGGGGTCCAACGCCATTCATGCCTTCACCATTTATACCAGGTGCACCAAATGTACCAACGATACTGCCTGATCAGTATTTTGCTACCCAGAGAATGCGTGGACTTCAGGAACAGCAGAGAAGTGCTGTTGTACAGCAGCAGAGTAGTAGAGAAGGCAGTGGTACAGAACCAGGTACGTCAAATTCACGTTCAATGGTTAAAACAACGAGGGAAATGGCTGAGAGTCTTTATGAGGGTACAGGTGCAAATGGTAGCtttcttgataatttaataagaTCAAGTTTGGAGACTGGTATACCGAGGGATCAACGGGGTATTACTGAAGGACGGGGTCAGGGGCATCATCCTGAAGCAATGAGTAGTAAAGCATTGATTGATCAACTGTGCAGGAACTCAAGACGTACACCATTACCCAGAATGACAGATAGCAGTGAAGATGAGAGCTATCGTCCATCAAGATCATTACCAGAGAGACCAGAGAGAGTACCAACTGTTGATTTGAGTCCATCCCCAACGGATCGAATAAGAAATGATGATCAGGGCAGTGATCGTTTAACATCACCACCAACGCCCTTGTCAATCAGTAGAGCTGGTAGTCGTGATGATGACACAAGGGATTCACGTAATGATCGCGGTAGTAGAGAGCGTGAGGTACATAATGGTGGTGATGAGCCACGTAAAACAATACTACAACAGCAACAGCTGAATCACTACCCGGATATACACAATCTTTATGCCGtatcaaatgagaaaaaaagtgccTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAACAGCAACCACAACAGCAGAAGGAATTTGGTGCTGTGAGCGGGCTGGTAGTGCAACTTCAGAGAGGCTACAATTCTGCTAGTAATTCAAGAACAACGGAACAAGAACAACAGAATAATTCACAGCCAGTAGCGCAGCCTGTTCAGGAGCCACACGGACCTGCCCTCACCATGGAAGACTCCGTAGAGCAGTAG
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSSTRSESASQPHHRLYPALSTTCSNLAAGNASQIGSQHHRQASTGTVHHQSSTPPLSATVITTTGQEHTSIKQKELTNHRGGEESCRIRPEDIKLEIEAAQEVNSGGRSELLQHGEVHTLRIQERTRQRVNENGEDEDFNENENDSESAEKRLKLDDSLRTSVSPLRENERSPSRDSRANEGTEPEGTKEPSAENALDRIQVTPGLLRVKKEEELQELPQQVNCGGGDTTRVDTEVNRPITKEQSESINDCTLTYPVNRRVSPPPEDWKPLDKCYLCLDGKLPHDDQAPLSPQSESSSSSRSAESPMSVQVDPMAASAVVAAALSGAYPTLLPQWGLPPRDAPLVGIQTHHDTGQSADQPLDLSAKPKNSQDNNISMLDQQKIPLRMPANIDPKTIFTSSYRQKPRLPGQTGVGGVPVVGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHESGVPVSTTTITSTIPTSTTTASTPNTTQNASATSPPPQVDEADDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGRDSLRTLLQRGHETGTEWPGFEHANIGPYIHKMLAAAGPFKGLENQEYRIPEVMRRLMSEDKRLNKDVNGDQSHSHVQSPQSQSLQGGQQQRLPMTNDDFNPAIEEEASDSAQGRAILKIPSYKPASTPGSSKNNGEPNSAAFAQGFAASSSAAGSPGLLERASPAFSGTSSPTNSLVGKGVSVNFRDVIAKSISSKFQEGQSGQTNVTQTPTPLLSDSNPFKRGRYTPPQTAHQQQTQQQKSQSQENKSKPSAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSEDKSKDSPTAPSSLRPAHQDKKPPLKPQKSFTQGPGGLPGGPNGLKMPFLDGMPHLPFPHPFNFGWGPTPFMPSPFIPGAPNVPTILPDQYFATQRMRGLQEQQRSAVVQQQSSREGSGTEPGTSNSRSMVKTTREMAESLYEGTGANGSFLDNLIRSSLETGIPRDQRGITEGRGQGHHPEAMSSKALIDQLCRNSRRTPLPRMTDSSEDESYRPSRSLPERPERVPTVDLSPSPTDRIRNDDQGSDRLTSPPTPLSISRAGSRDDDTRDSRNDRGSREREVHNGGDEPRKTILQQQQLNHYPDIHNLYAVSNEKKSACDSKLIVDHSSQKTQQQPQQQKEFGAVSGLVVQLQRGYNSASNSRTTEQEQQNNSQPVAQPVQEPHGPALTMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00047881;
- 90% Identity
- iTF_01273011;
- 80% Identity
- -