Aput014543.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- retn
- Assembly
- GCA_943137145.2
- Location
- CALPBO020000684.1:1-5034[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-19 1.2e-15 57.9 0.0 18 89 1 70 1 70 0.94 2 2 4.7 6.7e+03 -2.2 0.0 25 38 197 210 159 213 0.55
Sequence Information
- Coding Sequence
- ACTCCAATAAACCGACTACCAATAATGGCGAAGTCGGTGCTGGACCTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGCGGGTTGGTGGAGGTCATCAACAAAAAGTTGTGGCAGGAGATCATCAAAGGATTACGGCTCCCTTCTTCCATCACATCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTATGATTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCCATTGAAGGCAATAAGCGTGAGGGACGTCGCGCCTCTGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCGCTGTCACTGGGAGGTGTGGCCCCGCGGCTGCCGCCACTTCCACCGCACGCACCTCACCTGGCCCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATTCAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCTCCCAGCAACGGACAAGCGCCAATAATGTCACCTCGCGACGCCGCCCTCAGTGCCATAGACGTGTCCCGCCTCACGCTCTGGTCTCTCTACAACAATAACAACAACAACAGCCCACAACCGGATCTAGAGCCGCAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTATGACGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCACCCCCCCTCGCGCCCCGCCTCGCCCCGCGACCACCTGCACTCCCCGCAGCACCGCCACAGCCGCAGGGACACCACGTCGCCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCTTTCAAGATTACCACAAGAGGAGACGCGAGCACAGGCGACCAACAACTAGTGGTATCAATAGAGCTGAACGGAGTAACATATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- TPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSMTSGGKREACRSPAPPAKRRTPHPPSRPASPRDHLHSPQHRHSRRDTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_00042414;