Aput018932.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- retn
- Assembly
- GCA_943137145.2
- Location
- CALPBO020001348.1:4431-12792[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 4.2e-16 59.4 0.0 17 89 3 73 1 73 0.94 2 2 4.7 6.8e+03 -2.2 0.0 25 38 200 213 162 216 0.55
Sequence Information
- Coding Sequence
- ATGACTAGCACTCCAATAAACCGACTACCAATAATGGCGAAGTCGGTGCTGGACCTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGCGGGTTGGTGGAGGTCATCAACAAAAAGTTGTGGCAGGAGATCATCAAAGGATTACGGCTCCCTTCTTCCATCACATCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTATGATTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCCATTGAAGGCAATAAGCGTGAGGGACGTCGCGCCTCTGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCGCTGTCACTGGGAGGTGTGGCCCCGCGGCTGCCGCCACTTCCACCGCACGCACCTCACCTGGCCCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATTCAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCTCCCAGCAACGGACAAGCGCCAATAATGTCACCTCGCGACGCCGCCCTCAGTGCCATAGACGTGTCCCGCCTCACGCTCTGGTCTCTCTACAACAATAACAACAACAACAGCCCACAACCGGATCTAGAGCCGCAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTATGACGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCACCCCCCCTCGCGCCCCGCCTCGCCCCGCGACCACCTGCACTCCCCGCAGCACCGCCACAGCCGCAGGGACACCACGTCGCCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCTTTCAAGATTACCACAAGAGGAGACGCGAGCACAGGCGACCAACAACTAGTGGTATCAATAGAGCTGAACGGAGTAACATATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MTSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSMTSGGKREACRSPAPPAKRRTPHPPSRPASPRDHLHSPQHRHSRRDTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_00042415;