Aher007280.1
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963693445.1
- Location
- OY856313.1:2215183-2233662[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-77 5.2e-73 246.7 23.0 1 297 135 425 135 427 0.87 2 2 1 2.9e+04 -6.1 16.1 1 49 424 471 422 498 0.66
Sequence Information
- Coding Sequence
- ATGGGCAGGCGGTCCGAGGTGGTGACACCTGACAACAGTGACGAGGAAAGCGGTGAAGCCTTCACCGACGGTGACTTCGGCGATACCGACGATGATCTCATCGATGTCGCTGAAACAGAACCTACCGACAAATCTAATCTTCCAGTAACAGAAACTTTAAATATGGATGTTAAGAATGTAAATGCAGATACGAACGGTAACTCTAATGATAATGGCTTTGATGGACACGTTAATGGCTCGGATGATCAACCCAAGGTTAACGGACGCAAGAATAGTGTCGGACAATCAAGCGATTTGGGAAACCATAGTACCTATAATGTCAGTGCTACAGAATTGCGAAGAAATTCCCATGGGGATCTGAATCCGTCGATTATTGGAATTCTGGGTGGTCAGCAGAATCATGCAGAGCAGCGGTTGGCGGCGCGACGAGCGGCGCGAGCGGAGGCGCGGGAAATACGCATGCGCGAGCTTGAACGTCAGCAGCGGGAACAAGAAGACCATGCCGATAAGGCGTATGATATGTACACAGAGACGGTGACGCGCCGCGGTGTGCCGCGACTAGCAGCGATGAGCCCGGCGGTGCTGCACTCGCCGCGACGCAGCTCCGAAGACTCGGCGGACGACACTTTCAGCATCAAGGACCTTAGGCACGAGTTGAAGGAGGTCGAAGAGAAGTTCCGTAAGGCGATGATCCTAAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACAGGATAGAGGAACTGCACGAGGAACACGCACAGTTACAGCGAGAACACAGAGAGAAATGCTCAACGCACGAGCGTTTAAAACGCGAGCACGCGTCGTTAGAGCGTGAACTGTCCGCCGCGCGGGACGCGGTGCGGGCGCGcgacgcggccgccactcgcgCCGGCTTCGCGTTTGTTGAGGCCGCGGGGGTGGAGGGCggcgagggggagggggagggggtgCCGGCGGGGGAGGCGTGCGGCGTGGTCCCCGCGCTCGCGCTCGTGAGCCACCAGTCCGAGCAGCTGCTTAACGACGCCGGGGAGGGCACGCTGGACGTGCGGTTGCAGAAGCTGCTCTCGTCGAAGCTGGGGCTGGAGTCGGACGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCGCCAACCATCACGACCAGGAATACGAGAACGAACTGGAAACACTACGCAAATCAGTAGCCGATGCAAAAGGAAGAGCCGCGCGAGCGGAAGCCGAAGCGGCGCTACAAGCAGCCGCCGTAGCGCGACTCGAGGCACAAGTATCAAGACTGCGCGCCCGACAGGACCACCAGGACGAGCACGAGGAGCAACTGAAGCAGGAGCGACGGAAGCTGCAGAGAGAGGCGAGGGAAGCTCTCAACCGAGTAGAAGAATTAGAAACGGAGAACAGTCATCTAACGAAACGTCTGGATAAGCTGAAGAATGCAAAGTCAGCGCTTCTGAAGGACCTGTGA
- Protein Sequence
- MGRRSEVVTPDNSDEESGEAFTDGDFGDTDDDLIDVAETEPTDKSNLPVTETLNMDVKNVNADTNGNSNDNGFDGHVNGSDDQPKVNGRKNSVGQSSDLGNHSTYNVSATELRRNSHGDLNPSIIGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVTRRGVPRLAAMSPAVLHSPRRSSEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHREKCSTHERLKREHASLERELSAARDAVRARDAAATRAGFAFVEAAGVEGGEGEGEGVPAGEACGVVPALALVSHQSEQLLNDAGEGTLDVRLQKLLSSKLGLESDVRKLKLQLNEERAARQNGVANHHDQEYENELETLRKSVADAKGRAARAEAEAALQAAAVARLEAQVSRLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401311;
- 90% Identity
- iTF_00026870;
- 80% Identity
- -