Aaln052677.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- tfip11
- Assembly
- GCA_950111635.2
- Location
- OX467719.1:19684039-19708113[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-98 6.3e-94 316.3 14.3 1 275 401 673 401 673 0.98 2 2 0.082 2.4e+03 -0.5 0.1 157 188 685 715 675 730 0.49
Sequence Information
- Coding Sequence
- ATGTCTGACGAAGAggtggagaaatttgagattaCAGACTATGACTTGGAAAatgaatttaatataaatagaaatagaaaaaaacagaGTAAACACCATCAGATTTAtgGTATATGGGCAGATGATAGTGATAATGAAGAAGACCATAAACGATCTTTAAAGAGTAGGAAGCAGCCAAAGAATTACACAGCTCCCATTGGTTTTGTAGCAGGTGGAGTCCACCAAGCTGGTAAAAAGAAAGATCAAAAACCAGAGAAAAAAGATGAAATCTCAGATGAAGATGAACCTAGAACTTCATTTACAACTCGGGATAGTTCAGATGATTCCGAAAATGAAATGCCTGCAAGAGCAGGATTTGGGATTGGAAACTCAAGAAAACCTTTACAATCGACTATGACTGAAACAAACGCAGATATTGCTggtttaaggaaaaaaaatttgaacccTTCATTAGTAAATAAAGGAGTTGGACATTGGGAAAAACATACAAAGGGGATTGGAGCCAAATTGTTGCTTCAAATGGGTTTCCAACCTGGTAAAGGGCTGGGAAAAGATTTACAAGGTATATCAGCACCTGTAGAGGCTCACCTTAGAAAAGGTAGAGGGGCTATAGGGGCTTATGGACCTGAAAAACCTGCAAGTATACCTAAAGTCAAggaGAAAGAATTGAAATTAGAAATTGGTGACGAACCTGACGAACAAAAAGGGGAAtccaaatggaaaaaaaatgaatcactTACCAAGAAGAGCAGATACTATTATAGAAGCGTTGACGATGTTATCGAAAAAGGTAAACGACCAGGAGCTTATAGAAATTTCGGAAACGCAAGcgAACTTAGTAAGGTAAAGGTAATAGATATGACAGGCCCTCAACAGAGAGTACTTAGTGGATACCATGCTTTGAGCGGTTTAAAAGCACCTCCAGGAGTTGAACATTTTGAAGATgttgtacacaaaaaatgttctaATTTTGCGTTGCCGGAAATTCAGCACAATTTGGATTTGTTAGTTGATATTTGTGAAcagGACATTATCAGAACAGATAGAAACACCAAAATTAACGAGGATAAAATTATAACTTTGGAACAAGAAGAGAAATCTTTCAAGGATGTATTAAAGAAGGAAGATGCAATATTGGAAAATTTACGAGAAGTGATGGAAATCGTTGAAAAATTAATGGACAGCTCTCAAAGTTTTTCGCTTGGACAGAttgctattatttttaaacagttgCAGgAGGATCATTACGAAGAATATTTAATGTACGAATTGGGTGAATTGGCTCCTGGTCTGATTGGTCCGCTGTTAACTTCCGCTTTGGCCAGTTGGAACCCATTGATGCAACCTAAACAGTATACGGACGTGTTCGGTCAATGGAAGGAAATCTTGGAAATGGCGTTTCGACATCGAGGGAATCTAGAAGGTAATAAAATGGGAATACAGCCATATGATAGTCTCATTTGGCATACTTGGATGCCTGTTATGAGAACTTGTGTTAGttCGTGGAATCCGCGAGATTGCGATCCTCTCATAACTCTCATAGACACGTGGAAGCCTCTACTTCCCCAGTGGGTGATAGAAAACATTTTCGATCAATTAGTAATGCCGAAAATTATTAAGGAAGTTAATGAATGGAATCCGCTTACGGACACTATACCCATACACGTTTGGGTTCATCCTTGGATTCCGTTGTTAGATGAGAGACTCCAAGCAACAGTTTATCCTGTAATTCAAGAAAAATTAGGCAACGCTTTGACAAACTGGCATCCATCGGACAGGTCAGCTAAGTTGATGCTTCAACCGTGGCAAAGGGCGTTATCAAAAGGAGCTTTCGTAGCTTTTCTTCTTAAACACATCGTACCCAAGCTGCAAATATGTATGCAGTCATTAGCCATTAACCCCCACCAACAACACCTAGATCCCTGGCATTGGGTGATGGACTGGAGCAATATGGTGTCCATTGGTAACATGACGTTAATTTTAGACAAATTCTTCTTTCCGAGATGGCTGCAAACACTGGCATTGTGGTTGAATCATAATCCGAATTACACCCAAGTGACTGAATGGTATTCCGGATGGAAAAGGATGCTATCTGAGGAATTATTTAATCAACCCACAATAAAAGAGCATTTTCATAAAGCTCTCGAAATGATGAACAGGGCTGTTAACATTGGTCAGCAGCCCGGAGCTAAGGAATCAATTTCGTACCTTAAGAATATGGAAGAAAATGGTATAACACCAACTCCTGTAGCACAACCACGAGTAGagACGATTGCAGAAGCAGTAAAGACAGCTTCAAAGATTCCTCAAGGATTTAAGGATCTCGTTATGAAGAGATGTGAAGACAGAGGTATTCTTTTCGTCCCCATTCCAAATAAATATCACGAAGCGAAACAAGTGTACAAAATCGGATCGAATGGAATGCAGTGTTATATTGACAGAAACGTAATATTTTATTCTCAAAATAATTCAATTTGGATTCCCACTTCACTTAACAAGTTGCTAGATTCAGCATag
- Protein Sequence
- MSDEEVEKFEITDYDLENEFNINRNRKKQSKHHQIYGIWADDSDNEEDHKRSLKSRKQPKNYTAPIGFVAGGVHQAGKKKDQKPEKKDEISDEDEPRTSFTTRDSSDDSENEMPARAGFGIGNSRKPLQSTMTETNADIAGLRKKNLNPSLVNKGVGHWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPASIPKVKEKELKLEIGDEPDEQKGESKWKKNESLTKKSRYYYRSVDDVIEKGKRPGAYRNFGNASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVDICEQDIIRTDRNTKINEDKIITLEQEEKSFKDVLKKEDAILENLREVMEIVEKLMDSSQSFSLGQIAIIFKQLQEDHYEEYLMYELGELAPGLIGPLLTSALASWNPLMQPKQYTDVFGQWKEILEMAFRHRGNLEGNKMGIQPYDSLIWHTWMPVMRTCVSSWNPRDCDPLITLIDTWKPLLPQWVIENIFDQLVMPKIIKEVNEWNPLTDTIPIHVWVHPWIPLLDERLQATVYPVIQEKLGNALTNWHPSDRSAKLMLQPWQRALSKGAFVAFLLKHIVPKLQICMQSLAINPHQQHLDPWHWVMDWSNMVSIGNMTLILDKFFFPRWLQTLALWLNHNPNYTQVTEWYSGWKRMLSEELFNQPTIKEHFHKALEMMNRAVNIGQQPGAKESISYLKNMEENGITPTPVAQPRVETIAEAVKTASKIPQGFKDLVMKRCEDRGILFVPIPNKYHEAKQVYKIGSNGMQCYIDRNVIFYSQNNSIWIPTSLNKLLDSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00792175; iTF_00735560; iTF_00056586; iTF_00387240; iTF_01047274; iTF_00910743; iTF_00458921; iTF_00436955; iTF_01105920;
- 90% Identity
- -
- 80% Identity
- -