Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01021038.1:1-2338[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00017 0.014 16.5 3.0 1 23 61 84 61 84 0.98

2 18 3.6e-05 0.0029 18.6 1.0 1 23 93 116 93 116 0.96

3 18 0.013 1.1 10.5 0.6 2 23 129 151 129 151 0.97

4 18 0.00072 0.058 14.5 1.1 1 23 160 183 160 183 0.96

5 18 1.3e-05 0.001 20.0 1.9 1 23 195 218 195 218 0.97

6 18 0.00022 0.018 16.1 0.9 2 23 245 267 244 267 0.97

7 18 0.00021 0.017 16.2 3.5 2 23 277 299 276 299 0.97

8 18 0.021 1.7 9.9 0.8 2 19 304 321 303 324 0.92

9 18 0.00089 0.071 14.2 0.5 2 21 329 348 329 351 0.95

10 18 0.12 9.6 7.5 2.0 3 23 361 382 360 382 0.95

11 18 0.0042 0.34 12.1 5.7 1 23 387 410 387 410 0.94

12 18 8.1e-05 0.0065 17.5 3.7 2 23 422 444 421 444 0.97

13 18 0.016 1.3 10.3 1.7 1 23 471 494 471 495 0.94

14 18 0.057 4.6 8.5 0.2 2 23 501 522 500 522 0.95

15 18 0.034 2.8 9.2 1.8 3 23 527 547 526 547 0.97

16 18 3 2.4e+02 3.1 1.8 3 23 555 577 553 577 0.90

17 18 0.026 2.1 9.6 0.1 1 23 613 635 613 635 0.96

18 18 0.16 13 7.1 2.0 1 23 641 664 641 664 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00017	0.014	16.5	3.0	1	23	61	84	61	84	0.98
2	18	3.6e-05	0.0029	18.6	1.0	1	23	93	116	93	116	0.96
3	18	0.013	1.1	10.5	0.6	2	23	129	151	129	151	0.97
4	18	0.00072	0.058	14.5	1.1	1	23	160	183	160	183	0.96
5	18	1.3e-05	0.001	20.0	1.9	1	23	195	218	195	218	0.97
6	18	0.00022	0.018	16.1	0.9	2	23	245	267	244	267	0.97
7	18	0.00021	0.017	16.2	3.5	2	23	277	299	276	299	0.97
8	18	0.021	1.7	9.9	0.8	2	19	304	321	303	324	0.92
9	18	0.00089	0.071	14.2	0.5	2	21	329	348	329	351	0.95
10	18	0.12	9.6	7.5	2.0	3	23	361	382	360	382	0.95
11	18	0.0042	0.34	12.1	5.7	1	23	387	410	387	410	0.94
12	18	8.1e-05	0.0065	17.5	3.7	2	23	422	444	421	444	0.97
13	18	0.016	1.3	10.3	1.7	1	23	471	494	471	495	0.94
14	18	0.057	4.6	8.5	0.2	2	23	501	522	500	522	0.95
15	18	0.034	2.8	9.2	1.8	3	23	527	547	526	547	0.97
16	18	3	2.4e+02	3.1	1.8	3	23	555	577	553	577	0.90
17	18	0.026	2.1	9.6	0.1	1	23	613	635	613	635	0.96
18	18	0.16	13	7.1	2.0	1	23	641	664	641	664	0.96

Sequence Information

Coding Sequence: TTTGCCAATGACAGCGGTCTCATGCTGGAGGGGCCCAATAGCGAAGATAGTCAAGAGCCAGCTGTGAAATTGGATCCGCAAAACAAAGAGGCGGTTCTGTTGACATTTGAAAGTATTATACACGAAAATAAACTGTTCGCGATCAGCGAGTCACTGGAGGCTCCCCAGTCAGCGCCGAACTACGTGTGCAAAGTATGTCACCTAGTGTTCCAGTCGCCCAAAACGTTGAGGATGCACCAGAAACGAAAACACAAAGTGTACCGAAGATCATTCAAACACATTTGTGATTACTGCGGCATGTCTTACGAGCAGAAGAACAGCTTGGTCGCCCACATAAAGAGAAAGCACGGTCCTAACGCCGTGCCTGACGATAGGGAGGAAAGGACTTGTGATGTATGTGCGCTAGTTTTTAAGGGTCTTAATAGGTTAAGGATGCACATGAGGAGGAAGCACGGCTCCTTCGAGGACTCCTTCAAGCACGTATGCCAGGAATGCGGTCTGACATACGACAAATACAGAAGTTTGATAGTTCACATACAAAGGAAACACACCAGCGACAATAAGAAGGTTCTAGATCAATGGTTCAGCTGTCCGTTCTGTCCGAAGGTTTTCACGAGACGGGAAACGTACTCGAGACACGTGCAAAGGAAGCATCGCATTGACGACGAGGAGAACGGCGATAGACAAACTGATTTGATAGGGAATTGCAAAAACGAGGAAACCGGTGAGATTACTTGTAAACAGTGCCCTCTAGTGTTCTCGTCTgtgaatttcttaaaattacaCATGAGAAGAAAACACAACGCGCTAAGAGAGGACTTCCGACTGAAATGCAAGATTTGTCACCTGTCCTACAACAAGATTGAGAGCCTGAAGAGACATATTAGAAGAAAACACGACAAGGGTTCGTATTGTGAAGTGTGCAATAAGCAGTTCGACACAAGGGAATCGTACTTAAATCATTCGCATATGAAGGCAATCAGGGAATGCACTATTTGCGGACTGATCTTTGCATCCAAGGGCGGCCTGGGGAAACACATGAGGTGCACGCACAAAGTGGACGAACCGAAAACCGTTTTCTGCACGTTGTGTAACGAAGGCTTTCACGATAAAAGGCAGCTGAAGCCGCATTACATGAAAGTGCATTTAAAAGTGTCCTACACGTGCCACTTCTGCAGTAAACAATTCAAAGCGAAAGAGAGTTATAGAAGACATATTCTGTTCAAACACCCCGCGAACAGTGAAGCTAACAGTCAACTTCAGAAATGTGAACATTGTCCGGAGACTTTTAGAGATGAGTTTGAACTGTGTAAACACATCAATAGTTCACACGGTTCTAAAGACTTAGAAGCGGCTGCAACGGAAGgtgatatcaaaattaaaaaggagGAACCAGATATTAAGGATTGCTTCCAATGCACAAAGTGTCCCGAGAACTATTTAACGTGGGATCAGTTGAGGCTGCATTACGAGCAAAACCACCACATGACCGAGGACACACAGTGTCAGGTGTGCGGTAAAATAATGCCGGCGAATGAACTGCAGAAACACATAAAGACCACGCACGCATTAGCCAACTGCAGATATTGCGAGTTCCAAACGACAAATCGTGCTAGTATGACTCAGCACATGTTAAGGCACAAGAACGCGACGACGTTGCATTGCGACTTCGCCGGGTGCAAATACAAGACGTTCTACGAAGTGGCCATGGAGAAACATAGACGGAAGCACCGAGACATTGGAGTGAAACTGCAGTGCTCTCAATGTCCGTTCCAATCCATGAACAagtatatacttaaatatcacGAGGAAGCCCACATGACGGGCAAGAAGAGGTACGCTTGCGACCAGTGCGATTACGCGACGATCTTGCCGGCTAATCTAGTACAACATAAGTATAAGCATTCTTCGGAGAAAAGGTTCAAGTGCGAAGTGTGCCCCTTCGCCACGAAGTACAATACCTCGTTGCGCTTCCAcgtaaagaaaaaacattgtGATCTCCCTACGTTCAGTTAA
Protein Sequence: FANDSGLMLEGPNSEDSQEPAVKLDPQNKEAVLLTFESIIHENKLFAISESLEAPQSAPNYVCKVCHLVFQSPKTLRMHQKRKHKVYRRSFKHICDYCGMSYEQKNSLVAHIKRKHGPNAVPDDREERTCDVCALVFKGLNRLRMHMRRKHGSFEDSFKHVCQECGLTYDKYRSLIVHIQRKHTSDNKKVLDQWFSCPFCPKVFTRRETYSRHVQRKHRIDDEENGDRQTDLIGNCKNEETGEITCKQCPLVFSSVNFLKLHMRRKHNALREDFRLKCKICHLSYNKIESLKRHIRRKHDKGSYCEVCNKQFDTRESYLNHSHMKAIRECTICGLIFASKGGLGKHMRCTHKVDEPKTVFCTLCNEGFHDKRQLKPHYMKVHLKVSYTCHFCSKQFKAKESYRRHILFKHPANSEANSQLQKCEHCPETFRDEFELCKHINSSHGSKDLEAAATEGDIKIKKEEPDIKDCFQCTKCPENYLTWDQLRLHYEQNHHMTEDTQCQVCGKIMPANELQKHIKTTHALANCRYCEFQTTNRASMTQHMLRHKNATTLHCDFAGCKYKTFYEVAMEKHRRKHRDIGVKLQCSQCPFQSMNKYILKYHEEAHMTGKKRYACDQCDYATILPANLVQHKYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPTFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00673701;
90% Identity: iTF_01153194; iTF_00288251; iTF_01359982;
80% Identity: -