Adec017419.1
Basic Information
- Insect
- Adalia decempunctata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951802165.1
- Location
- OX637698.1:9841915-9846499[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.04 1.7e+03 -0.8 0.1 203 234 31 61 6 67 0.60 2 3 9e-104 3.9e-99 333.0 35.7 1 300 92 381 92 381 0.95 3 3 0.068 2.9e+03 -1.5 2.8 127 155 403 431 382 455 0.51
Sequence Information
- Coding Sequence
- ATGGAGAGTTCGGGAGAGCCGACGGACGAGGAAGACCGGGAGGAAGAGTCGTACACGGTGGCGAATCGGGTGCGACAGGTGGACGTTTCCGTTTCCGGGTCGAGCGATCACAACGACGTGTTGCGATCGGTTTCGGGCAGTTTGAACGACGACCTGGACGAGCTTGAAGATCCGAGAGCTGGTTTGAGTTGCGAAAGCGAAAACGACGGTTTCGGCGATGACGACAGCGACGGTGACATCATCTCCCAGTTCATGGACGTCGCGTGCGGGGAAGCTGAAGAAAGGCTGCGCGTGAAGAGGCAAGCAAGGGCCGAGGCCAGGGAGATTCGCATGAGAGAGCTGGAGAAGCAACAGAAAGAACAGGAGGAGAATGCCGACCGGCAGTTCGACATGCTGGCCGAGCCGGTGGTCAGGACGGCCAGGACTAGCATAAGCAGATACATGTCGAGCAGGAGGAGTTCCGAGGATTCCCTGGAGGACGGAGGCAGTCTCAGGGAATTGAGGCATGAACTAAGAGAAGTAGAGGACAAATTTAGAAAAGCTATGATAACTAATGCTCAACTTGACAACGAAAAAGCCTCCCTTACTTATCAAATAGAACTACTTAAAGATAAACTGCAAGAACTAGAAGAAGAACAGTCTCAGTTGAGGAGAGAACACAAGGAAAAATGTAGAGAACACGATCAGATGAAGAGGTTATGTACGAAGCTCAAGCATGACCTCGAAGTAACAAAAGCGGAACTGGACGAACGGGATAAACTTATTACGGAACATGGCTTAGTGATAGTGTCTGAGGAACTGGAAGAAACCAACGGTGATATTAGTATGAATAGTATGGGTACTCCCAAAAAGTCATTAGTGAAGGTAGAAAATGCTAAGTTGTTAGAAAACGCTGGGGATGGCACATTAGATGTTAGACTCTCAAGGTTCATGCAGGAGAAGCGAGACCTCGAAGATGAAATAAACCATTTGAAATTAGAGTTAGAAGAAGAAAAGAGCAGAAAGAGAAAATCGCACTCCATCAGTAGTACCAACGGCCCAGTATCAGATTTTGATGCAGATGGAGACACCCAAAAAGACGGAAGTAGTTTGCTGGCGGACTATAAATTCAGAGCCCAGAAGGCAGAGCAagatgtggcaacattgcaagCGACTGTTGCCAGATTGGAGAGCCAAGTCGTGAGGTATAAAGCCGCATCTGAGGCTTCTGAAAAACTGGAAGAGACCCTCAAATCTGAGAAGAGGAAGCTTCAGAGGGAGGCTCGTGATGCCATAAATAGGGCGGAGGAGTTAGAAACTTCGAACCTGCATTTGCTCAAAAGATTGGACAAACTGAAAAACGCAAAGTCGACACTCTTGAAGGAACTTTGA
- Protein Sequence
- MESSGEPTDEEDREEESYTVANRVRQVDVSVSGSSDHNDVLRSVSGSLNDDLDELEDPRAGLSCESENDGFGDDDSDGDIISQFMDVACGEAEERLRVKRQARAEAREIRMRELEKQQKEQEENADRQFDMLAEPVVRTARTSISRYMSSRRSSEDSLEDGGSLRELRHELREVEDKFRKAMITNAQLDNEKASLTYQIELLKDKLQELEEEQSQLRREHKEKCREHDQMKRLCTKLKHDLEVTKAELDERDKLITEHGLVIVSEELEETNGDISMNSMGTPKKSLVKVENAKLLENAGDGTLDVRLSRFMQEKRDLEDEINHLKLELEEEKSRKRKSHSISSTNGPVSDFDADGDTQKDGSSLLADYKFRAQKAEQDVATLQATVARLESQVVRYKAASEASEKLEETLKSEKRKLQREARDAINRAEELETSNLHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00646999;
- 90% Identity
- iTF_00349120;
- 80% Identity
- -