Basic Information

Insect: Acronicta leporina
Gene Symbol: lrrfip2
Assembly: GCA_947256265.1
Location: OX366515.1:1790415-1804060[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.72 8.7e+03 -3.9 0.4 254 278 76 101 50 104 0.45

2 3 3.9e-82 4.7e-78 262.9 14.5 1 297 122 410 122 412 0.93

3 3 2 2.4e+04 -6.1 16.4 1 48 409 455 409 484 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.72	8.7e+03	-3.9	0.4	254	278	76	101	50	104	0.45
2	3	3.9e-82	4.7e-78	262.9	14.5	1	297	122	410	122	412	0.93
3	3	2	2.4e+04	-6.1	16.4	1	48	409	455	409	484	0.72

Sequence Information

Coding Sequence: ATGGGACAACGCTCTGAAGTGGCCACGCCTGACAATAGCGACGACGAGAGCGGCGATGCTTTTACTGACGGCGATTTTGGGGATTCCGATGATGAAACGATCGTCGAACGTCATGATGAGGCTAAACCTTCTCATATACCTGTCAATGAAACTGTGAATGAAGATATTCAGAAATTTTCCGCTTCGAATAGTCATGCTAGTGCAGAAGAAGTTAATCCAAGAATTAATGGTCGCAAGAACAGTGAAATCAGTCACTCGAGTGATACTGAAAACCAAAGCTTAGTATTATCTGATTTGCGCAGAGATTCACACGGCGATCAGAATCCTTCAATAGTGGGAATTCTCGGTGATCAGCAGAATCATGCGGAACAGCGATTGGCAGCGCGTCGGGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAACTTGAGAGACAGCAGCGCGAACAGGAGGACCATGCCGACAAAGCATACGATATGTATGCGGGTAAAACACCAGAGACAGTGGGTCGTCGCGGTGGCACACGGCTGGCGGCACTCAGTCCGGCCGGTGTGCTTTCACCACGACGCAGCTCAGAGGACTCCGTCGATGATGGCTTCAGCATCAAAGATCTCAGGCATGAGCTGAAGGAGGTGGAGGAAAAGTTTCGTAAGGCGATGATCCTAAACGCGCAGTTGGATAATGACAAGGCGGCACTCGGCTACCAGCTGGAACTGCTTAAGGACAGGATAGAAGAATTACACGAAGAATACGCGCAACTGCAGCGCGAGCATAAAGAGAAATGCTCGTCATTCGAGCGCCTAAAGCGCGAGCACTCGGCGGTGACGCGGGAGCTGAGCGCGGCGCGGGACGCCGTGCGCGCGCGCGACGCGGCCGCCGACGCCGCCGGGTTCGCCTTCGTGGACGCCGCGGGCGCAGGCGCGGCCCCGCCCCCGCCCGGCGCGGCCCCGCCCCCGCCCGCGCTCGCGCTCGTCACGCACTCGGCGCAACAGCTGCTCGACGACGCCGGGGAGGGCACGCTCGATGTTCGGTTGCAAAACCTACTGAGTTCGAAGCAAGCACTAGAGTCAGAGGTGCGCAAATTGAAGTTACAGCTGAACGAGGAGCGCGCTGCCCGACAGAACGGAGTCGCCAACCACCACGACAACGAATACGAGAACGAACTTGAGACTGTGCGAAAGTCTGTATCCGAGGCAAAGGCTAGGGCGGCGCGCGCCGAGGCTGAGGCAGCGCTGCAGGCCGCGCACGTGGCGCGCCTCGAGGCACAGCTGGCGCGCCTGCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGCTCGGGAAGCACTCAACCGGGTTGAAGAGTTGGAGACTGAGAATAGCCACCTCACGAAACGACTAGACAAACTCAAGAACGCAAAGTCCGCGCTGCTGAAGGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDDESGDAFTDGDFGDSDDETIVERHDEAKPSHIPVNETVNEDIQKFSASNSHASAEEVNPRINGRKNSEISHSSDTENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGGTRLAALSPAGVLSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHSAVTRELSAARDAVRARDAAADAAGFAFVDAAGAGAAPPPPGAAPPPPALALVTHSAQQLLDDAGEGTLDVRLQNLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDNEYENELETVRKSVSEAKARAARAEAEAALQAAHVARLEAQLARLRARHAHQDEHEEQLKHERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00383680;
80% Identity: -