Acha005196.1
Basic Information
- Insect
- Acromyrmex charruanus
- Gene Symbol
- ct
- Assembly
- GCA_017607545.1
- Location
- JAANIC010004024.1:3441546-3455084[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5e-28 2e-24 84.4 0.0 2 72 243 314 242 319 0.95 2 3 1.1e-32 4.9e-29 99.2 0.0 3 77 644 719 642 721 0.96 3 3 4.5e-31 2e-27 94.0 0.0 3 75 870 943 868 947 0.95
Sequence Information
- Coding Sequence
- ATGAGccaacagcagcaacagcagcagcagcagcaacaacaacagcagcagcaacagcaacaacagcagcaacaatCACAGCCATCTCAACTAAGCCAATTAACTCAACAGCAACAACAATTACAACAAGCCCAACCGCACATGGGTTTACATCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCGCCGGGTGCGGATCCATCGTCCACTTCAAACACTCCGGTGAAATCGAACACACCGATCGGTACAACATCTTTGGGCAGTTTAGATGTCACTGAGAAAGCGCCAACGCCAGTATCAGGACATGAAACACCAGCCCCTCCAACACCATCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACCCCTTCAGCTTCCATCAATGGCAGCGGTCTCACACCGGGCGTACCAAGTGCACCGCCCCCGAAGAGTCCGCCTGATCAAGAATCATgtcacaataataataatagccaTCATCTAGCAAATAACAATATCGGCGGGCTAAGCGTTCTCGATACGCTGAAGAGTCCGTTTCGGTTTGACGATCGAACGTATCCCTTCCGATTCGGCGACGAGTTCGGTGCCGCTGGTATGGCCGGTCGGCTGGGCGAGTCTCTCATTCCAAAGGGAGATCCCATGGAGGCGAGACTGCAGGAAATGTTGCGCCATAATATGGACAAATATGCCTCACAGAATCTTGACACTCTTCATATAGCCAGGCGGGTGCGCGAACTATTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATATGTTCTTGGGCTAAGTCAAGGCACGGTCAGCGAGTTACTTAGTAAGCCCAAGCCTTGGGACAAGTTAACCGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAAGGAATGCCAGCATTCGCACGTGGACCACAGGATAGTGGTCCGCAAGAAATGAGTGATGAAAGATTGGCACATATTCTGTCGGAATCGAGCCATATGCAAATGAGAGGTGAGCACGAAGTATCGAACGATGCTGACAGCAAGAGTCCGAACAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGACTGAAGAAATATGAAAACGACGACATTCCCCAGGAGAAGGTAGTAAGGATTTACCAAGAAGAACTGGCTAAGCTGATGGGCACGAGAGTGGAGAATCTTCGTCCGCGAGAGTTCCCTAGTGGTACGCAGAGCAGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGATTAGCATTGGACGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGACTGGACTCCCAGGATTGCCTGGATTACCAGGTTTGTTGGCGCTTCAGCAACAAGCTCTTCAACAACATCATTTAGCTGCGAATGGCGGCGGTGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaatggtgtgtcagaagaagaaaaagagaagatggAAGAGGCGATGAGACACGCCGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACAGGTCCTCAATCAACGCCTGGCGGTTCTAGCGCAAGTTCACCGCTTGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAAGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCATCATTCAGCCAATCAAAGACCGTTGAAAGCTGTGCTTCCTCCGATCACGCAACAGCAGTTCGACCTGTACAATAATCTTAATACGGAAGATATTGTGAAAAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCGCAGCGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTAACCCAAAAAGGTCGTGAGCCCTTTATCCGAATGAAAATGTTCCTCGAAGACGACAACGCGGTGCACAAGCTCGTCGCCAGCCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCcTTGCGGAACACCTATGAAACCTATGCCACCAACAAAACTCGTCCAAGAACAGCTTCAGAATGCAGCGAAGGCGCAAGCCGCCGCTCAAGCAGCCGCACAAGCAGCGGCGCAACAGCATCAACAGGAAAATCAGATGCAACTCGGCCCGCCACAACAAAGTCCTCAACATCCACAACATCCACAACCGCCACCACCGATGATGTTGACCCCACCTGGACCTCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAGaaacaacagcagcagcagcaacaaatGTCACTACACTCGCCACATCATCAAATGGCACCGTCGCCTCTTCGAAGTCTTCATCCTCACATTTCACCAAGCGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACAACAAAGATCAAGGAAGCGTTATTAGCTAACAATATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCGCAGGGTTCTGTCAGCGAATTACTCAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGTCGAGAGCCTTTCATTAGGATGCAGCTTTGGCTGTCAGATGCACACAATGTTGATCGATTGCAAGCGTTGAAGAATGAACGACGAGAGGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCACGATAACAGTTCTGATACTTCAAGCAACGACACAGCCGAATTCTATCATGCGGCATCACCTGGTCCGGGACCTACTACCGGGAAGAAGCAGCGCGTTCTTTTCTCGGAAGAACAGAAAGAAGCTCTCAGACTCGCTTTCGCCTTGGATCCTTATCCCAATGTGGCTACCATCGAATTCCTCGCTGGTGAATTGGCTCTGTCGTCGAGAACAATAACAAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACACCGCACGGCCAACCAGAGCCGCAGTCGCCACGAGAACCTGGTCAACCGTTCGATCCTGTTCAATTCAGACTGCTGTTAAACCAAAGACTGCTGGAGATTCAAAAGGAGAGATTGGGTCTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCCAATCTGGCGGCTCTGGTAGGTAATGCACTGAAGGAACAATGCTCTGGTCTGGACCTCTCGATGAATGCTCTAAAGAGAGAGCCCAATCAAGAATTCGAAGATGAAGATGTCGACGATGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCGGCCAGTAGTATAAAGAGAGAACCTACAGAAACACCGACGGCACCCACGACGGTCAGGTCCAATAGAAGAAAACCCGCGGCACCGCAATGGGTGAATCCGGAGTGGCAAGAACCAACGAGAACAGGCGACGAAGTTATCATCAATGGAGTTTGTGTGATGCAGACGGACGATTATGGAGTAAAAAGAGAGGCCGAAGAAACTATAAGAGTTGAACCGACACCAGTGCAAGATCGATATGAAGAAGATGCTCAAAGCGATGTCTCTTCCGTGTCTGGCAACAATGGAGCCGATCGGGATAGTCCGCTTCCCAGTCCAAAATCTGGTCAAAACAGTCCAGCGACGTCGCTCAGACCGCCGTCAGCGCAACAGACGCAACAGTCCACGGAGGAGAGTCCAAAGGATGTGGTGAAACACGAACCGGAGGAAACGTGGGATTAC
- Protein Sequence
- MSQQQQQQQQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTSLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDSGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSGTQSSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_00014625; iTF_00015843; iTF_00015943; iTF_01422115; iTF_01422025; iTF_01421348; iTF_01421436; iTF_00125796; iTF_00125698; iTF_01268808; iTF_01268904; iTF_01267338; iTF_01267437; iTF_00264905; iTF_00264800; iTF_01098985; iTF_01099088; iTF_00385068; iTF_00385162; iTF_01270988; iTF_01271086; iTF_01408847; iTF_01408953; iTF_00182435; iTF_00182514; iTF_01405479; iTF_01405577; iTF_00181213; iTF_00181112; iTF_01269588; iTF_01269685; iTF_01355102; iTF_01355206;
- 80% Identity
- iTF_00014625;